[3,5-Dihydroxy-2-(hydroxymethyl)-6-[4-(16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl)-2-methylbutoxy]oxan-4-yl] 3-methylbutanoate

Details

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Internal ID d6e6bf2c-4ae8-46aa-b3ef-bf4a2fd0845d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [3,5-dihydroxy-2-(hydroxymethyl)-6-[4-(16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl)-2-methylbutoxy]oxan-4-yl] 3-methylbutanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C38H62O9/c1-20(2)15-31(41)47-35-33(42)30(18-39)46-36(34(35)43)44-19-21(3)7-10-28-22(4)32-29(45-28)17-27-25-9-8-23-16-24(40)11-13-37(23,5)26(25)12-14-38(27,32)6/h20-21,23-27,29-30,32-36,39-40,42-43H,7-19H2,1-6H3
InChI Key RVPVXPRFEDWZHO-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C38H62O9
Molecular Weight 662.90 g/mol
Exact Mass 662.43938355 g/mol
Topological Polar Surface Area (TPSA) 135.00 Ų
XlogP 6.00
Atomic LogP (AlogP) 5.12
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [3,5-Dihydroxy-2-(hydroxymethyl)-6-[4-(16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl)-2-methylbutoxy]oxan-4-yl] 3-methylbutanoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8976 89.76%
Caco-2 - 0.8615 86.15%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.8092 80.92%
OATP2B1 inhibitior - 0.5774 57.74%
OATP1B1 inhibitior + 0.8041 80.41%
OATP1B3 inhibitior + 0.8763 87.63%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.7436 74.36%
P-glycoprotein inhibitior + 0.6999 69.99%
P-glycoprotein substrate + 0.6689 66.89%
CYP3A4 substrate + 0.7526 75.26%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8749 87.49%
CYP3A4 inhibition - 0.8791 87.91%
CYP2C9 inhibition - 0.8531 85.31%
CYP2C19 inhibition - 0.9084 90.84%
CYP2D6 inhibition - 0.9287 92.87%
CYP1A2 inhibition - 0.9133 91.33%
CYP2C8 inhibition + 0.6349 63.49%
CYP inhibitory promiscuity - 0.8860 88.60%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5543 55.43%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9221 92.21%
Skin irritation - 0.5272 52.72%
Skin corrosion - 0.9452 94.52%
Ames mutagenesis - 0.7269 72.69%
Human Ether-a-go-go-Related Gene inhibition + 0.6965 69.65%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.5195 51.95%
skin sensitisation - 0.9032 90.32%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.8625 86.25%
Acute Oral Toxicity (c) I 0.5311 53.11%
Estrogen receptor binding + 0.7636 76.36%
Androgen receptor binding + 0.7694 76.94%
Thyroid receptor binding - 0.6581 65.81%
Glucocorticoid receptor binding + 0.5583 55.83%
Aromatase binding + 0.6418 64.18%
PPAR gamma + 0.6233 62.33%
Honey bee toxicity - 0.6326 63.26%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9455 94.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.29% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.87% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.61% 97.09%
CHEMBL204 P00734 Thrombin 92.46% 96.01%
CHEMBL237 P41145 Kappa opioid receptor 91.20% 98.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.18% 94.45%
CHEMBL5255 O00206 Toll-like receptor 4 90.81% 92.50%
CHEMBL4588 P22894 Matrix metalloproteinase 8 90.50% 94.66%
CHEMBL4581 P52732 Kinesin-like protein 1 90.30% 93.18%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.49% 97.25%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 89.34% 96.38%
CHEMBL2996 Q05655 Protein kinase C delta 89.30% 97.79%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.25% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.97% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 87.95% 96.47%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.11% 100.00%
CHEMBL3437 Q16853 Amine oxidase, copper containing 85.41% 94.00%
CHEMBL226 P30542 Adenosine A1 receptor 84.35% 95.93%
CHEMBL3975 P09467 Fructose-1,6-bisphosphatase 84.27% 92.95%
CHEMBL5028 O14672 ADAM10 83.96% 97.50%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.96% 96.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.82% 99.17%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 83.72% 97.47%
CHEMBL2514 O95665 Neurotensin receptor 2 83.57% 100.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.49% 82.50%
CHEMBL340 P08684 Cytochrome P450 3A4 83.38% 91.19%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.19% 95.56%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.05% 98.75%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.30% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.13% 89.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 81.88% 97.29%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.67% 96.61%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 81.45% 92.88%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.31% 90.71%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 80.97% 96.37%
CHEMBL1075317 P61964 WD repeat-containing protein 5 80.86% 96.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.35% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cestrum parqui

Cross-Links

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PubChem 73797120
LOTUS LTS0045274
wikiData Q105246186