(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[4-[(E)-5-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]pent-1-en-4-ynyl]phenoxy]oxane-3,4,5-triol

Details

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Internal ID 34c030fe-74c4-4b88-ad2f-b691cc04cd13
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[4-[(E)-5-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]pent-1-en-4-ynyl]phenoxy]oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H34O13/c30-13-20-22(33)24(35)26(37)28(41-20)39-17-9-6-15(7-10-17)4-2-1-3-5-16-8-11-19(18(32)12-16)40-29-27(38)25(36)23(34)21(14-31)42-29/h2,4,6-12,20-38H,1,13-14H2/b4-2+/t20-,21-,22-,23-,24+,25+,26-,27-,28-,29-/m1/s1
InChI Key PJJKYTFWWMYPOS-LITNSJRUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H34O13
Molecular Weight 590.60 g/mol
Exact Mass 590.19994113 g/mol
Topological Polar Surface Area (TPSA) 219.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -1.80
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[4-[(E)-5-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]pent-1-en-4-ynyl]phenoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8708 87.08%
Caco-2 - 0.8893 88.93%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.5539 55.39%
OATP2B1 inhibitior - 0.7110 71.10%
OATP1B1 inhibitior + 0.9087 90.87%
OATP1B3 inhibitior + 0.9637 96.37%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.6321 63.21%
P-glycoprotein inhibitior + 0.5759 57.59%
P-glycoprotein substrate - 0.8700 87.00%
CYP3A4 substrate + 0.5747 57.47%
CYP2C9 substrate + 0.5822 58.22%
CYP2D6 substrate - 0.8126 81.26%
CYP3A4 inhibition - 0.8335 83.35%
CYP2C9 inhibition - 0.8924 89.24%
CYP2C19 inhibition - 0.8322 83.22%
CYP2D6 inhibition - 0.9056 90.56%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.7213 72.13%
CYP inhibitory promiscuity - 0.5808 58.08%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.6001 60.01%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.9001 90.01%
Skin irritation - 0.8373 83.73%
Skin corrosion - 0.9541 95.41%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7916 79.16%
Micronuclear - 0.5200 52.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.8017 80.17%
Respiratory toxicity - 0.6556 65.56%
Reproductive toxicity - 0.5000 50.00%
Mitochondrial toxicity - 0.7250 72.50%
Nephrotoxicity - 0.8185 81.85%
Acute Oral Toxicity (c) III 0.5630 56.30%
Estrogen receptor binding + 0.7498 74.98%
Androgen receptor binding + 0.5592 55.92%
Thyroid receptor binding + 0.5712 57.12%
Glucocorticoid receptor binding - 0.4824 48.24%
Aromatase binding + 0.6111 61.11%
PPAR gamma + 0.7283 72.83%
Honey bee toxicity - 0.7530 75.30%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8583 85.83%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.11% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 96.16% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 93.92% 86.92%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.91% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.34% 86.33%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 92.94% 83.57%
CHEMBL3194 P02766 Transthyretin 92.15% 90.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.62% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.62% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.02% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.24% 95.89%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.45% 99.15%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 87.09% 91.71%
CHEMBL2243 O00519 Anandamide amidohydrolase 87.02% 97.53%
CHEMBL4208 P20618 Proteasome component C5 85.73% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 84.37% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.75% 94.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 81.74% 92.32%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 80.23% 95.58%
CHEMBL264 Q9Y5N1 Histamine H3 receptor 80.18% 91.43%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypoxis colchicifolia

Cross-Links

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PubChem 101679366
LOTUS LTS0195415
wikiData Q104392144