[(1S,2S,3S,4R,6R)-4-[(3S,5S)-5,6-dihydroxy-6-methyl-3-[(Z)-2-methylbut-2-enoyl]oxyhept-1-en-2-yl]-2-hydroxy-1-methyl-7-oxabicyclo[4.1.0]heptan-3-yl] (Z)-2-methylbut-2-enoate

Details

Top
Internal ID dfc61570-0c2d-4178-b1d5-5ef5ddf79124
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids
IUPAC Name [(1S,2S,3S,4R,6R)-4-[(3S,5S)-5,6-dihydroxy-6-methyl-3-[(Z)-2-methylbut-2-enoyl]oxyhept-1-en-2-yl]-2-hydroxy-1-methyl-7-oxabicyclo[4.1.0]heptan-3-yl] (Z)-2-methylbut-2-enoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H38O8/c1-9-13(3)22(28)31-17(12-18(26)24(6,7)30)15(5)16-11-19-25(8,33-19)21(27)20(16)32-23(29)14(4)10-2/h9-10,16-21,26-27,30H,5,11-12H2,1-4,6-8H3/b13-9-,14-10-/t16-,17+,18+,19-,20+,21+,25-/m1/s1
InChI Key XBFROGMXPDZSOT-HJXYWPHLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C25H38O8
Molecular Weight 466.60 g/mol
Exact Mass 466.25666817 g/mol
Topological Polar Surface Area (TPSA) 126.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.36
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(1S,2S,3S,4R,6R)-4-[(3S,5S)-5,6-dihydroxy-6-methyl-3-[(Z)-2-methylbut-2-enoyl]oxyhept-1-en-2-yl]-2-hydroxy-1-methyl-7-oxabicyclo[4.1.0]heptan-3-yl] (Z)-2-methylbut-2-enoate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9040 90.40%
Caco-2 - 0.7216 72.16%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6638 66.38%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8702 87.02%
OATP1B3 inhibitior + 0.9051 90.51%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.6996 69.96%
P-glycoprotein inhibitior + 0.6004 60.04%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6704 67.04%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8751 87.51%
CYP3A4 inhibition - 0.6282 62.82%
CYP2C9 inhibition - 0.7545 75.45%
CYP2C19 inhibition - 0.6949 69.49%
CYP2D6 inhibition - 0.9207 92.07%
CYP1A2 inhibition - 0.8366 83.66%
CYP2C8 inhibition - 0.6452 64.52%
CYP inhibitory promiscuity - 0.9637 96.37%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9243 92.43%
Carcinogenicity (trinary) Non-required 0.6795 67.95%
Eye corrosion - 0.9827 98.27%
Eye irritation - 0.9165 91.65%
Skin irritation - 0.6433 64.33%
Skin corrosion - 0.9227 92.27%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4858 48.58%
Micronuclear - 0.5341 53.41%
Hepatotoxicity + 0.6107 61.07%
skin sensitisation - 0.6610 66.10%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.4409 44.09%
Estrogen receptor binding + 0.7821 78.21%
Androgen receptor binding + 0.5249 52.49%
Thyroid receptor binding + 0.6413 64.13%
Glucocorticoid receptor binding + 0.7405 74.05%
Aromatase binding + 0.7050 70.50%
PPAR gamma + 0.6597 65.97%
Honey bee toxicity - 0.5884 58.84%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9815 98.15%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.18% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.10% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.83% 97.25%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 92.33% 96.95%
CHEMBL2581 P07339 Cathepsin D 91.49% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.75% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.52% 94.45%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.84% 89.34%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.82% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.61% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.78% 89.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.77% 91.07%
CHEMBL340 P08684 Cytochrome P450 3A4 84.53% 91.19%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.24% 100.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 84.13% 98.75%
CHEMBL2413 P32246 C-C chemokine receptor type 1 82.53% 89.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.20% 97.14%
CHEMBL3401 O75469 Pregnane X receptor 82.17% 94.73%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.09% 97.28%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.05% 93.56%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.96% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.85% 95.89%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 80.72% 92.88%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ligularia cymbulifera

Cross-Links

Top
PubChem 162919973
LOTUS LTS0227462
wikiData Q105324378