(1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(1R,2S,3R,5R,6S,10S,16R,17R)-2,6-dimethyl-20-oxo-8-azahexacyclo[11.5.1.11,5.02,10.03,8.016,19]icos-13(19)-ene-17-carbonyl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

Details

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Internal ID 290b23fc-e4a2-45fa-ab6d-7836afd78854
Taxonomy Alkaloids and derivatives > Yuzurimine-type alkaloids
IUPAC Name (1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(1R,2S,3R,5R,6S,10S,16R,17R)-2,6-dimethyl-20-oxo-8-azahexacyclo[11.5.1.11,5.02,10.03,8.016,19]icos-13(19)-ene-17-carbonyl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical) CC1CN2CC3CCC4=C5C(CC4)C(CC56C3(C2CC1C6=O)C)C(=O)OCC7C(C(C(C(O7)OC8C9C(CC=C9CO)C(=CO8)C(=O)O)O)O)O
SMILES (Isomeric) C[C@@H]1CN2C[C@H]3CCC4=C5[C@H](CC4)[C@@H](C[C@]56[C@]3([C@H]2C[C@H]1C6=O)C)C(=O)OC[C@@H]7[C@H]([C@@H]([C@H]([C@@H](O7)O[C@H]8[C@H]9[C@H](CC=C9CO)C(=CO8)C(=O)O)O)O)O
InChI InChI=1S/C38H49NO12/c1-16-11-39-12-19-6-3-17-4-8-21-23(10-38(28(17)21)32(44)22(16)9-26(39)37(19,38)2)34(47)48-15-25-29(41)30(42)31(43)36(50-25)51-35-27-18(13-40)5-7-20(27)24(14-49-35)33(45)46/h5,14,16,19-23,25-27,29-31,35-36,40-43H,3-4,6-13,15H2,1-2H3,(H,45,46)/t16-,19-,20-,21-,22-,23-,25-,26-,27-,29-,30+,31-,35+,36+,37-,38+/m1/s1
InChI Key BGFSQHCTVLDZEX-QTLPULPNSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C38H49NO12
Molecular Weight 711.80 g/mol
Exact Mass 711.32547600 g/mol
Topological Polar Surface Area (TPSA) 193.00 Ų
XlogP -2.80
Atomic LogP (AlogP) 1.29
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(1R,2S,3R,5R,6S,10S,16R,17R)-2,6-dimethyl-20-oxo-8-azahexacyclo[11.5.1.11,5.02,10.03,8.016,19]icos-13(19)-ene-17-carbonyl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7340 73.40%
Caco-2 - 0.8767 87.67%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5860 58.60%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7986 79.86%
OATP1B3 inhibitior + 0.9354 93.54%
MATE1 inhibitior - 0.9420 94.20%
OCT2 inhibitior - 0.8021 80.21%
BSEP inhibitior - 0.5968 59.68%
P-glycoprotein inhibitior + 0.7081 70.81%
P-glycoprotein substrate + 0.6448 64.48%
CYP3A4 substrate + 0.7289 72.89%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8603 86.03%
CYP3A4 inhibition - 0.9008 90.08%
CYP2C9 inhibition - 0.9046 90.46%
CYP2C19 inhibition - 0.9220 92.20%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.9053 90.53%
CYP2C8 inhibition + 0.7300 73.00%
CYP inhibitory promiscuity - 0.9631 96.31%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Danger 0.5271 52.71%
Eye corrosion - 0.9853 98.53%
Eye irritation - 0.9184 91.84%
Skin irritation - 0.7165 71.65%
Skin corrosion - 0.9254 92.54%
Ames mutagenesis - 0.6070 60.70%
Human Ether-a-go-go-Related Gene inhibition - 0.3890 38.90%
Micronuclear + 0.6200 62.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.8597 85.97%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity + 0.5435 54.35%
Acute Oral Toxicity (c) III 0.5783 57.83%
Estrogen receptor binding + 0.8222 82.22%
Androgen receptor binding + 0.7614 76.14%
Thyroid receptor binding - 0.5783 57.83%
Glucocorticoid receptor binding + 0.6386 63.86%
Aromatase binding + 0.6282 62.82%
PPAR gamma + 0.6630 66.30%
Honey bee toxicity - 0.7003 70.03%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.8966 89.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.52% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.30% 97.09%
CHEMBL2581 P07339 Cathepsin D 96.01% 98.95%
CHEMBL5255 O00206 Toll-like receptor 4 94.32% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.23% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.63% 86.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.06% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.41% 96.61%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 88.35% 94.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.08% 95.56%
CHEMBL340 P08684 Cytochrome P450 3A4 86.59% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.50% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.72% 99.23%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 83.96% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.03% 100.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.75% 93.56%
CHEMBL1811 P34995 Prostanoid EP1 receptor 82.66% 95.71%
CHEMBL5028 O14672 ADAM10 82.08% 97.50%
CHEMBL2514 O95665 Neurotensin receptor 2 81.86% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.12% 95.89%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 81.03% 80.33%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.07% 91.71%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.01% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphniphyllum calycinum

Cross-Links

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PubChem 21580235
LOTUS LTS0237503
wikiData Q104935500