(1S,3S)-1-[[(2S,3R,4S)-3-ethenyl-5-methoxycarbonyl-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]methyl]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole-3-carboxylic acid

Details

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Internal ID 5a9570d8-ebdf-404a-bbbb-cad69ce16467
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (1S,3S)-1-[[(2S,3R,4S)-3-ethenyl-5-methoxycarbonyl-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]methyl]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole-3-carboxylic acid
SMILES (Canonical) COC(=O)C1=COC(C(C1CC2C3=C(CC(N2)C(=O)O)C4=CC=CC=C4N3)C=C)OC5C(C(C(C(O5)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@@H]([C@@H]1C[C@H]2C3=C(C[C@H](N2)C(=O)O)C4=CC=CC=C4N3)C=C)O[C@@H]5[C@H]([C@@H]([C@H]([C@@H](O5)CO)O)O)O
InChI InChI=1S/C28H34N2O11/c1-3-12-14(8-18-21-15(9-19(29-18)25(35)36)13-6-4-5-7-17(13)30-21)16(26(37)38-2)11-39-27(12)41-28-24(34)23(33)22(32)20(10-31)40-28/h3-7,11-12,14,18-20,22-24,27-34H,1,8-10H2,2H3,(H,35,36)/t12-,14+,18+,19+,20+,22+,23-,24+,27+,28-/m1/s1
InChI Key LHKZIVMTXZLOTP-AZAOCEFRSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H34N2O11
Molecular Weight 574.60 g/mol
Exact Mass 574.21625990 g/mol
Topological Polar Surface Area (TPSA) 200.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -0.15
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,3S)-1-[[(2S,3R,4S)-3-ethenyl-5-methoxycarbonyl-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]methyl]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole-3-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8170 81.70%
Caco-2 - 0.8888 88.88%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Nucleus 0.5108 51.08%
OATP2B1 inhibitior - 0.8590 85.90%
OATP1B1 inhibitior + 0.7768 77.68%
OATP1B3 inhibitior + 0.9436 94.36%
MATE1 inhibitior - 0.9420 94.20%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8447 84.47%
P-glycoprotein inhibitior - 0.5000 50.00%
P-glycoprotein substrate + 0.5866 58.66%
CYP3A4 substrate + 0.7150 71.50%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8422 84.22%
CYP3A4 inhibition - 0.9029 90.29%
CYP2C9 inhibition - 0.7560 75.60%
CYP2C19 inhibition - 0.8235 82.35%
CYP2D6 inhibition - 0.8044 80.44%
CYP1A2 inhibition - 0.7398 73.98%
CYP2C8 inhibition + 0.7306 73.06%
CYP inhibitory promiscuity - 0.7535 75.35%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6472 64.72%
Eye corrosion - 0.9876 98.76%
Eye irritation - 0.9473 94.73%
Skin irritation - 0.7843 78.43%
Skin corrosion - 0.9366 93.66%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8190 81.90%
Micronuclear + 0.8300 83.00%
Hepatotoxicity - 0.6966 69.66%
skin sensitisation - 0.8327 83.27%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.5666 56.66%
Acute Oral Toxicity (c) III 0.6014 60.14%
Estrogen receptor binding + 0.7961 79.61%
Androgen receptor binding + 0.6823 68.23%
Thyroid receptor binding + 0.5152 51.52%
Glucocorticoid receptor binding + 0.5870 58.70%
Aromatase binding - 0.5136 51.36%
PPAR gamma + 0.6767 67.67%
Honey bee toxicity - 0.7119 71.19%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.7012 70.12%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.23% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.02% 96.09%
CHEMBL2581 P07339 Cathepsin D 94.30% 98.95%
CHEMBL220 P22303 Acetylcholinesterase 91.62% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.10% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.84% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.67% 89.00%
CHEMBL5028 O14672 ADAM10 88.46% 97.50%
CHEMBL4040 P28482 MAP kinase ERK2 87.78% 83.82%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.77% 99.17%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 87.20% 95.83%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.05% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.24% 99.23%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.48% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.14% 95.89%
CHEMBL2717 Q9HCR9 Phosphodiesterase 11A 81.98% 85.00%
CHEMBL3401 O75469 Pregnane X receptor 81.57% 94.73%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 81.29% 94.08%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.45% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Psychotria bahiensis
Simira rubescens
Stenostomum acreanum

Cross-Links

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PubChem 163194024
LOTUS LTS0079556
wikiData Q105151823