(2R,3R,4S,5S,6R)-2-[[(3S,5S,6S,8R,9R,10R,12R,13S,14R,17S)-3,12-dihydroxy-17-[(2S,5S)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID bd8277dd-b29c-44cb-ab7f-e8e2622d5b52
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[[(3S,5S,6S,8R,9R,10R,12R,13S,14R,17S)-3,12-dihydroxy-17-[(2S,5S)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H62O10/c1-31(2)23(39)10-12-33(5)22-15-19(38)25-18(36(8)14-11-24(46-36)32(3,4)43)9-13-34(25,6)35(22,7)16-20(29(31)33)44-30-28(42)27(41)26(40)21(17-37)45-30/h18-30,37-43H,9-17H2,1-8H3/t18-,19+,20-,21+,22+,23-,24-,25+,26+,27-,28+,29+,30+,33+,34+,35+,36-/m0/s1
InChI Key PSOUXXNNRFNUAY-QYWAQODMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C36H62O10
Molecular Weight 654.90 g/mol
Exact Mass 654.43429817 g/mol
Topological Polar Surface Area (TPSA) 169.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.51
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[[(3S,5S,6S,8R,9R,10R,12R,13S,14R,17S)-3,12-dihydroxy-17-[(2S,5S)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7200 72.00%
Caco-2 - 0.8408 84.08%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7535 75.35%
OATP2B1 inhibitior - 0.8639 86.39%
OATP1B1 inhibitior + 0.8629 86.29%
OATP1B3 inhibitior + 0.9253 92.53%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.8907 89.07%
P-glycoprotein inhibitior + 0.7003 70.03%
P-glycoprotein substrate - 0.6312 63.12%
CYP3A4 substrate + 0.7410 74.10%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8413 84.13%
CYP3A4 inhibition - 0.8653 86.53%
CYP2C9 inhibition - 0.8724 87.24%
CYP2C19 inhibition - 0.9152 91.52%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9167 91.67%
CYP2C8 inhibition + 0.6538 65.38%
CYP inhibitory promiscuity - 0.9266 92.66%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6372 63.72%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9148 91.48%
Skin irritation - 0.6785 67.85%
Skin corrosion - 0.9474 94.74%
Ames mutagenesis - 0.7470 74.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7559 75.59%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.9303 93.03%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8347 83.47%
Acute Oral Toxicity (c) I 0.6880 68.80%
Estrogen receptor binding + 0.5470 54.70%
Androgen receptor binding + 0.7226 72.26%
Thyroid receptor binding - 0.5404 54.04%
Glucocorticoid receptor binding + 0.6419 64.19%
Aromatase binding + 0.6900 69.00%
PPAR gamma + 0.6500 65.00%
Honey bee toxicity - 0.6298 62.98%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.8744 87.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.14% 97.25%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.81% 96.61%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 95.54% 96.21%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.36% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.23% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.60% 91.11%
CHEMBL2996 Q05655 Protein kinase C delta 92.94% 97.79%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 92.64% 100.00%
CHEMBL4302 P08183 P-glycoprotein 1 91.98% 92.98%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 91.65% 89.05%
CHEMBL259 P32245 Melanocortin receptor 4 91.12% 95.38%
CHEMBL1871 P10275 Androgen Receptor 89.57% 96.43%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.13% 95.50%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 88.94% 96.77%
CHEMBL1914 P06276 Butyrylcholinesterase 88.51% 95.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.42% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.08% 95.89%
CHEMBL226 P30542 Adenosine A1 receptor 87.91% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.02% 86.33%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 86.33% 97.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.00% 94.45%
CHEMBL1977 P11473 Vitamin D receptor 83.67% 99.43%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.37% 96.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.37% 85.14%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.96% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.79% 92.94%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.54% 94.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.39% 95.89%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 81.38% 96.67%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.31% 96.90%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 80.35% 95.58%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax vietnamensis

Cross-Links

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PubChem 163076854
LOTUS LTS0201607
wikiData Q105214306