methyl (1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate

Details

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Internal ID bcd232e4-9dd2-4043-9bd4-ed5ec222fdfa
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1CC=C2CO)OC3C(C(C(C(O3)COC4C(C(CO4)(CO)O)O)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@H]1CC=C2CO)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO[C@H]4[C@@H]([C@](CO4)(CO)O)O)O)O)O
InChI InChI=1S/C22H32O14/c1-31-18(29)11-5-32-19(13-9(4-23)2-3-10(11)13)36-20-16(27)15(26)14(25)12(35-20)6-33-21-17(28)22(30,7-24)8-34-21/h2,5,10,12-17,19-21,23-28,30H,3-4,6-8H2,1H3/t10-,12-,13-,14-,15+,16-,17+,19+,20+,21-,22-/m1/s1
InChI Key OOUBSPPBTVIADD-IDPBDCHGSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C22H32O14
Molecular Weight 520.50 g/mol
Exact Mass 520.17920569 g/mol
Topological Polar Surface Area (TPSA) 214.00 Ų
XlogP -4.10
Atomic LogP (AlogP) -3.76
H-Bond Acceptor 14
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,4aS,7aS)-1-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6500 65.00%
Caco-2 - 0.8824 88.24%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7412 74.12%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8436 84.36%
OATP1B3 inhibitior + 0.9648 96.48%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.7929 79.29%
P-glycoprotein inhibitior - 0.6769 67.69%
P-glycoprotein substrate - 0.5423 54.23%
CYP3A4 substrate + 0.6832 68.32%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.9720 97.20%
CYP2C9 inhibition - 0.9350 93.50%
CYP2C19 inhibition - 0.8594 85.94%
CYP2D6 inhibition - 0.9076 90.76%
CYP1A2 inhibition - 0.9207 92.07%
CYP2C8 inhibition + 0.5549 55.49%
CYP inhibitory promiscuity - 0.8997 89.97%
UGT catelyzed - 0.6638 66.38%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5997 59.97%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9408 94.08%
Skin irritation - 0.7552 75.52%
Skin corrosion - 0.9483 94.83%
Ames mutagenesis + 0.5363 53.63%
Human Ether-a-go-go-Related Gene inhibition + 0.7420 74.20%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.8619 86.19%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.8229 82.29%
Acute Oral Toxicity (c) III 0.3751 37.51%
Estrogen receptor binding + 0.7091 70.91%
Androgen receptor binding + 0.5728 57.28%
Thyroid receptor binding - 0.5717 57.17%
Glucocorticoid receptor binding - 0.4727 47.27%
Aromatase binding + 0.6478 64.78%
PPAR gamma + 0.5361 53.61%
Honey bee toxicity - 0.7980 79.80%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.6792 67.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.25% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 95.07% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.23% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.44% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 85.45% 92.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.79% 94.33%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.64% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.18% 96.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 84.05% 96.90%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.03% 96.95%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.70% 95.83%
CHEMBL5028 O14672 ADAM10 83.41% 97.50%
CHEMBL3401 O75469 Pregnane X receptor 82.84% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.55% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.51% 99.23%
CHEMBL4208 P20618 Proteasome component C5 82.12% 90.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.91% 94.45%
CHEMBL2581 P07339 Cathepsin D 81.74% 98.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.14% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.13% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.11% 95.89%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.89% 97.36%
CHEMBL340 P08684 Cytochrome P450 3A4 80.86% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.76% 86.33%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.69% 97.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides

Cross-Links

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PubChem 71552450
NPASS NPC86095
LOTUS LTS0136539
wikiData Q105195596