(1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,12S,13R,14R,16R)-16-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',14-triol

Details

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Internal ID bb5e9105-ea72-48bb-a14e-1ed69cd50e7a
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,12S,13R,14R,16R)-16-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',14-triol
SMILES (Canonical) CC1COC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(C(CC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)O)C)C)C)C(C1O)O
SMILES (Isomeric) C[C@@H]1CO[C@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5([C@@H](C[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)O)C)C)C)[C@H]([C@H]1O)O
InChI InChI=1S/C45H72O20/c1-16-15-58-45(39(57)29(16)49)17(2)28-24(65-45)12-23-21-7-6-19-10-20(11-27(48)44(19,5)22(21)8-9-43(23,28)4)60-42-38(64-40-34(54)32(52)30(50)18(3)59-40)36(56)37(26(14-47)62-42)63-41-35(55)33(53)31(51)25(13-46)61-41/h6,16-18,20-42,46-57H,7-15H2,1-5H3/t16-,17+,18+,20-,21-,22+,23+,24+,25-,26-,27-,28+,29+,30+,31-,32-,33+,34-,35-,36+,37-,38-,39+,40+,41+,42-,43+,44+,45+/m1/s1
InChI Key LWPYPSWSBQHCMA-QKONOGSYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H72O20
Molecular Weight 933.00 g/mol
Exact Mass 932.46169468 g/mol
Topological Polar Surface Area (TPSA) 317.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.87
H-Bond Acceptor 20
H-Bond Donor 12
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,12S,13R,14R,16R)-16-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',14-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7571 75.71%
Caco-2 - 0.8899 88.99%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7376 73.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8703 87.03%
OATP1B3 inhibitior + 0.8994 89.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8641 86.41%
P-glycoprotein inhibitior + 0.7247 72.47%
P-glycoprotein substrate + 0.5933 59.33%
CYP3A4 substrate + 0.7509 75.09%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9268 92.68%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9343 93.43%
CYP1A2 inhibition - 0.9102 91.02%
CYP2C8 inhibition + 0.7706 77.06%
CYP inhibitory promiscuity - 0.9302 93.02%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5116 51.16%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9102 91.02%
Skin irritation + 0.4929 49.29%
Skin corrosion - 0.9426 94.26%
Ames mutagenesis - 0.8754 87.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7896 78.96%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.8321 83.21%
Acute Oral Toxicity (c) I 0.5904 59.04%
Estrogen receptor binding + 0.8289 82.89%
Androgen receptor binding + 0.7459 74.59%
Thyroid receptor binding - 0.5325 53.25%
Glucocorticoid receptor binding + 0.5711 57.11%
Aromatase binding + 0.6446 64.46%
PPAR gamma + 0.7496 74.96%
Honey bee toxicity - 0.5710 57.10%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9176 91.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.67% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.46% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 96.72% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.34% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.59% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.90% 89.00%
CHEMBL1914 P06276 Butyrylcholinesterase 91.70% 95.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.32% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.05% 86.33%
CHEMBL1871 P10275 Androgen Receptor 90.76% 96.43%
CHEMBL1937 Q92769 Histone deacetylase 2 90.71% 94.75%
CHEMBL325 Q13547 Histone deacetylase 1 88.96% 95.92%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.77% 92.94%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.19% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.61% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.47% 97.25%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 84.45% 97.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.21% 97.36%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 84.19% 89.05%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.20% 95.50%
CHEMBL5103 Q969S8 Histone deacetylase 10 83.13% 90.08%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.70% 92.86%
CHEMBL5255 O00206 Toll-like receptor 4 81.65% 92.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.55% 94.45%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 81.00% 94.01%
CHEMBL3401 O75469 Pregnane X receptor 80.27% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clintonia udensis

Cross-Links

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PubChem 102026850
LOTUS LTS0003417
wikiData Q105158503