5-(hydroxymethyl)-4-methyl-2-[1-(4,16,17-trihydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,14,15,16-octahydro-4H-cyclopenta[a]phenanthren-17-yl)ethyl]-2,3-dihydropyran-6-one

Details

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Internal ID 6f318c3a-c022-445c-9044-28b945f3406f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name 5-(hydroxymethyl)-4-methyl-2-[1-(4,16,17-trihydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,14,15,16-octahydro-4H-cyclopenta[a]phenanthren-17-yl)ethyl]-2,3-dihydropyran-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H38O7/c1-14-11-22(35-25(33)17(14)13-29)15(2)28(34)24(32)12-20-16-5-6-19-21(30)7-8-23(31)27(19,4)18(16)9-10-26(20,28)3/h6-8,15-16,18,20-22,24,29-30,32,34H,5,9-13H2,1-4H3
InChI Key VCPCVDLGWOGXSN-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H38O7
Molecular Weight 486.60 g/mol
Exact Mass 486.26175355 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 2.23
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-(hydroxymethyl)-4-methyl-2-[1-(4,16,17-trihydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,14,15,16-octahydro-4H-cyclopenta[a]phenanthren-17-yl)ethyl]-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9316 93.16%
Caco-2 - 0.7745 77.45%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.8506 85.06%
OATP2B1 inhibitior - 0.8608 86.08%
OATP1B1 inhibitior + 0.8521 85.21%
OATP1B3 inhibitior + 0.9104 91.04%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5438 54.38%
BSEP inhibitior + 0.9049 90.49%
P-glycoprotein inhibitior - 0.4321 43.21%
P-glycoprotein substrate + 0.5966 59.66%
CYP3A4 substrate + 0.7253 72.53%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9074 90.74%
CYP3A4 inhibition - 0.6702 67.02%
CYP2C9 inhibition - 0.9207 92.07%
CYP2C19 inhibition - 0.9298 92.98%
CYP2D6 inhibition - 0.9592 95.92%
CYP1A2 inhibition - 0.8394 83.94%
CYP2C8 inhibition + 0.5777 57.77%
CYP inhibitory promiscuity - 0.9718 97.18%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5841 58.41%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9612 96.12%
Skin irritation + 0.6992 69.92%
Skin corrosion - 0.9395 93.95%
Ames mutagenesis - 0.6124 61.24%
Human Ether-a-go-go-Related Gene inhibition - 0.5297 52.97%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.5301 53.01%
skin sensitisation - 0.9315 93.15%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.7189 71.89%
Acute Oral Toxicity (c) III 0.5786 57.86%
Estrogen receptor binding + 0.8728 87.28%
Androgen receptor binding + 0.7604 76.04%
Thyroid receptor binding + 0.6054 60.54%
Glucocorticoid receptor binding + 0.8277 82.77%
Aromatase binding + 0.6949 69.49%
PPAR gamma + 0.5849 58.49%
Honey bee toxicity - 0.7668 76.68%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9684 96.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.64% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.33% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.39% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.36% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.58% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 90.37% 94.75%
CHEMBL2581 P07339 Cathepsin D 89.50% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.25% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 88.15% 97.79%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.09% 94.45%
CHEMBL5103 Q969S8 Histone deacetylase 10 86.41% 90.08%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 85.31% 82.69%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.15% 97.14%
CHEMBL299 P17252 Protein kinase C alpha 85.05% 98.03%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.93% 96.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.29% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.12% 93.56%
CHEMBL4072 P07858 Cathepsin B 82.45% 93.67%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.29% 93.03%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.67% 93.99%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Withania aristata

Cross-Links

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PubChem 162889223
LOTUS LTS0112824
wikiData Q105283870