(2S,3R,4S,5S)-2-[(1S,2S,3S,4R,5R,6R)-2,4-diamino-5-[(2S,3R,6R)-3-amino-6-(methylaminomethyl)oxan-2-yl]oxy-3,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol

Details

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Internal ID dcaa4ed7-0cb3-412d-8cf6-96f9fba406f8
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides > Aminocyclitol glycosides
IUPAC Name (2S,3R,4S,5S)-2-[(1S,2S,3S,4R,5R,6R)-2,4-diamino-5-[(2S,3R,6R)-3-amino-6-(methylaminomethyl)oxan-2-yl]oxy-3,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H41N5O8/c1-20(29)7-30-19(14(28)17(20)25-3)33-16-11(23)12(26)10(22)15(13(16)27)32-18-9(21)5-4-8(31-18)6-24-2/h8-19,24-29H,4-7,21-23H2,1-3H3/t8-,9-,10-,11+,12+,13-,14-,15-,16+,17+,18+,19+,20-/m1/s1
InChI Key IAMSXPNLUNHNQH-LMWRFZOXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C20H41N5O8
Molecular Weight 479.60 g/mol
Exact Mass 479.29551328 g/mol
Topological Polar Surface Area (TPSA) 220.00 Ų
XlogP -5.50
Atomic LogP (AlogP) -4.75
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S)-2-[(1S,2S,3S,4R,5R,6R)-2,4-diamino-5-[(2S,3R,6R)-3-amino-6-(methylaminomethyl)oxan-2-yl]oxy-3,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9861 98.61%
Caco-2 - 0.8514 85.14%
Blood Brain Barrier - 1.0000 100.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Lysosomes 0.6833 68.33%
OATP2B1 inhibitior - 0.8617 86.17%
OATP1B1 inhibitior + 0.9309 93.09%
OATP1B3 inhibitior + 0.9415 94.15%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.9714 97.14%
P-glycoprotein inhibitior - 0.7550 75.50%
P-glycoprotein substrate - 0.8210 82.10%
CYP3A4 substrate + 0.6522 65.22%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate - 0.6940 69.40%
CYP3A4 inhibition - 0.9645 96.45%
CYP2C9 inhibition - 0.9110 91.10%
CYP2C19 inhibition - 0.9090 90.90%
CYP2D6 inhibition - 0.9089 90.89%
CYP1A2 inhibition - 0.9188 91.88%
CYP2C8 inhibition + 0.4730 47.30%
CYP inhibitory promiscuity - 0.9666 96.66%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5846 58.46%
Eye corrosion - 0.9835 98.35%
Eye irritation - 0.9613 96.13%
Skin irritation - 0.7584 75.84%
Skin corrosion - 0.9194 91.94%
Ames mutagenesis - 0.5437 54.37%
Human Ether-a-go-go-Related Gene inhibition - 0.4127 41.27%
Micronuclear + 0.6900 69.00%
Hepatotoxicity + 0.7060 70.60%
skin sensitisation - 0.8429 84.29%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.5643 56.43%
Acute Oral Toxicity (c) IV 0.6216 62.16%
Estrogen receptor binding - 0.6232 62.32%
Androgen receptor binding - 0.5755 57.55%
Thyroid receptor binding - 0.7538 75.38%
Glucocorticoid receptor binding + 0.6237 62.37%
Aromatase binding + 0.6800 68.00%
PPAR gamma + 0.5776 57.76%
Honey bee toxicity - 0.9015 90.15%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity - 0.9471 94.71%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.70% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.57% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.50% 96.09%
CHEMBL2243 O00519 Anandamide amidohydrolase 94.05% 97.53%
CHEMBL226 P30542 Adenosine A1 receptor 89.14% 95.93%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 88.18% 95.17%
CHEMBL4581 P52732 Kinesin-like protein 1 86.08% 93.18%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.70% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.66% 94.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.61% 96.77%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.71% 96.95%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.01% 97.28%
CHEMBL2815 P04629 Nerve growth factor receptor Trk-A 82.32% 87.16%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.03% 97.14%
CHEMBL5028 O14672 ADAM10 81.05% 97.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.04% 100.00%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 80.88% 95.58%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.79% 95.50%
CHEMBL3437 Q16853 Amine oxidase, copper containing 80.57% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162896841
LOTUS LTS0048876
wikiData Q105036196