9H-Xanthen-9-one, 1,3,5,6-tetrahydroxy-2-(3-methyl-2-butenyl)-

Details

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Internal ID db819473-5d7e-4a13-a551-3f738f3e66dd
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 2-prenylated xanthones
IUPAC Name 1,3,5,6-tetrahydroxy-2-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical) CC(=CCC1=C(C2=C(C=C1O)OC3=C(C2=O)C=CC(=C3O)O)O)C
SMILES (Isomeric) CC(=CCC1=C(C2=C(C=C1O)OC3=C(C2=O)C=CC(=C3O)O)O)C
InChI InChI=1S/C18H16O6/c1-8(2)3-4-9-12(20)7-13-14(15(9)21)16(22)10-5-6-11(19)17(23)18(10)24-13/h3,5-7,19-21,23H,4H2,1-2H3
InChI Key NPQLJYVRPMRCAL-UHFFFAOYSA-N
Popularity 17 references in papers

Physical and Chemical Properties

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Molecular Formula C18H16O6
Molecular Weight 328.30 g/mol
Exact Mass 328.09468823 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 4.00
Atomic LogP (AlogP) 3.28
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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9H-Xanthen-9-one, 1,3,5,6-tetrahydroxy-2-(3-methyl-2-butenyl)-
CHEMBL3422285
SCHEMBL24075573
DTXSID80439410
2-(3,3-dimethylallyl)-1,3,5,6-tetrahydroxyxanthone

2D Structure

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2D Structure of 9H-Xanthen-9-one, 1,3,5,6-tetrahydroxy-2-(3-methyl-2-butenyl)-

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9712 97.12%
Caco-2 - 0.6516 65.16%
Blood Brain Barrier - 0.6379 63.79%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5583 55.83%
OATP2B1 inhibitior - 0.5351 53.51%
OATP1B1 inhibitior + 0.9365 93.65%
OATP1B3 inhibitior + 0.9801 98.01%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.5128 51.28%
P-glycoprotein inhibitior - 0.7645 76.45%
P-glycoprotein substrate - 0.7489 74.89%
CYP3A4 substrate - 0.5056 50.56%
CYP2C9 substrate - 0.6039 60.39%
CYP2D6 substrate - 0.8389 83.89%
CYP3A4 inhibition - 0.6501 65.01%
CYP2C9 inhibition + 0.7858 78.58%
CYP2C19 inhibition + 0.6792 67.92%
CYP2D6 inhibition - 0.6287 62.87%
CYP1A2 inhibition + 0.8400 84.00%
CYP2C8 inhibition - 0.6594 65.94%
CYP inhibitory promiscuity + 0.8000 80.00%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7266 72.66%
Eye corrosion - 0.9886 98.86%
Eye irritation + 0.7214 72.14%
Skin irritation - 0.6879 68.79%
Skin corrosion - 0.8917 89.17%
Ames mutagenesis + 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7085 70.85%
Micronuclear + 0.5600 56.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.6270 62.70%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.8634 86.34%
Acute Oral Toxicity (c) III 0.5872 58.72%
Estrogen receptor binding + 0.8808 88.08%
Androgen receptor binding + 0.7714 77.14%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.8695 86.95%
Aromatase binding + 0.6452 64.52%
PPAR gamma + 0.9326 93.26%
Honey bee toxicity - 0.8773 87.73%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9915 99.15%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.56% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.69% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.77% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.61% 98.95%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 94.50% 89.34%
CHEMBL3401 O75469 Pregnane X receptor 94.05% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.71% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.50% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.21% 86.33%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 86.38% 98.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.06% 94.00%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 85.58% 85.30%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.63% 99.15%
CHEMBL3192 Q9BY41 Histone deacetylase 8 82.46% 93.99%
CHEMBL3038469 P24941 CDK2/Cyclin A 82.29% 91.38%
CHEMBL3194 P02766 Transthyretin 82.18% 90.71%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.47% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.17% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calophyllum brasiliense
Garcinia buchananii
Garcinia dulcis
Hypericum androsaemum
Hypericum sampsonii

Cross-Links

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PubChem 10404212
LOTUS LTS0049785
wikiData Q82255362