methyl (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aR,9R,10S,12aS,14aR,14bR)-10-[(2E)-3,7-dimethylocta-2,6-dienoyl]oxy-7,8-dihydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-9-(2-methylbutanoyl)-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-4-hydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate

Details

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Internal ID bd0991f4-4904-4ac6-888b-c7cc325ca1af
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name methyl (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aR,9R,10S,12aS,14aR,14bR)-10-[(2E)-3,7-dimethylocta-2,6-dienoyl]oxy-7,8-dihydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-9-(2-methylbutanoyl)-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-4-hydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C63H100O22/c1-14-31(5)41(68)40-53(82-39(67)24-30(4)17-15-16-29(2)3)58(6,7)25-33-32-18-19-37-60(10)22-21-38(59(8,9)36(60)20-23-61(37,11)62(32,12)51(75)52(76)63(33,40)28-66)81-57-49(84-56-46(73)44(71)42(69)34(26-64)79-56)47(74)48(50(85-57)54(77)78-13)83-55-45(72)43(70)35(27-65)80-55/h16,18,24,31,33-38,40,42-53,55-57,64-66,69-76H,14-15,17,19-23,25-28H2,1-13H3/b30-24+/t31?,33-,34+,35-,36-,37+,38-,40-,42+,43-,44-,45+,46+,47-,48-,49+,50-,51-,52+,53-,55-,56-,57+,60-,61+,62-,63+/m0/s1
InChI Key UXBMNZZPDDMDQB-NWGXVRBZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C63H100O22
Molecular Weight 1209.50 g/mol
Exact Mass 1208.67062481 g/mol
Topological Polar Surface Area (TPSA) 348.00 Ų
XlogP 5.10
Atomic LogP (AlogP) 2.43
H-Bond Acceptor 22
H-Bond Donor 11
Rotatable Bonds 18

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aR,9R,10S,12aS,14aR,14bR)-10-[(2E)-3,7-dimethylocta-2,6-dienoyl]oxy-7,8-dihydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-9-(2-methylbutanoyl)-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-4-hydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8817 88.17%
Caco-2 - 0.8637 86.37%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.8613 86.13%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7747 77.47%
OATP1B3 inhibitior + 0.8748 87.48%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.9841 98.41%
P-glycoprotein inhibitior + 0.7448 74.48%
P-glycoprotein substrate + 0.6829 68.29%
CYP3A4 substrate + 0.7511 75.11%
CYP2C9 substrate - 0.7960 79.60%
CYP2D6 substrate - 0.8978 89.78%
CYP3A4 inhibition - 0.7581 75.81%
CYP2C9 inhibition - 0.8187 81.87%
CYP2C19 inhibition - 0.8625 86.25%
CYP2D6 inhibition - 0.9301 93.01%
CYP1A2 inhibition - 0.8891 88.91%
CYP2C8 inhibition + 0.8153 81.53%
CYP inhibitory promiscuity - 0.8815 88.15%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4717 47.17%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.8976 89.76%
Skin irritation - 0.5785 57.85%
Skin corrosion - 0.9366 93.66%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7731 77.31%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.7657 76.57%
skin sensitisation - 0.9035 90.35%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.5705 57.05%
Acute Oral Toxicity (c) III 0.6370 63.70%
Estrogen receptor binding + 0.7112 71.12%
Androgen receptor binding + 0.7676 76.76%
Thyroid receptor binding + 0.6503 65.03%
Glucocorticoid receptor binding + 0.7934 79.34%
Aromatase binding + 0.6725 67.25%
PPAR gamma + 0.8049 80.49%
Honey bee toxicity - 0.6139 61.39%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9739 97.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.43% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 99.00% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.92% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.60% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 94.82% 90.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.57% 97.25%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 92.04% 94.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.18% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.51% 95.89%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 89.40% 95.50%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 88.97% 97.47%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.12% 93.56%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.99% 96.61%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.91% 95.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 87.63% 91.07%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.58% 96.21%
CHEMBL3401 O75469 Pregnane X receptor 86.97% 94.73%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.22% 97.14%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 86.04% 96.77%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.99% 92.62%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.18% 91.24%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.56% 100.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.14% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.02% 95.50%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 82.99% 95.71%
CHEMBL5255 O00206 Toll-like receptor 4 82.60% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.55% 86.33%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.18% 96.90%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.54% 97.50%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 81.07% 85.30%
CHEMBL4208 P20618 Proteasome component C5 81.01% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Symplocos paniculata

Cross-Links

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PubChem 101371233
LOTUS LTS0089557
wikiData Q105280694