(2R,3R,4S,5S,6R)-2-[[(1S,2S,3aR,5aR,5bR,7aR,9S,11aR,11bR,13aR,13bS)-2-hydroxy-3a-(hydroxymethyl)-1-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a-pentamethyl-1,2,3,4,5,6,7,7a,9,10,11,11b,12,13,13a,13b-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 406483fb-98b1-4b9c-b2b6-8478fb195719
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[[(1S,2S,3aR,5aR,5bR,7aR,9S,11aR,11bR,13aR,13bS)-2-hydroxy-3a-(hydroxymethyl)-1-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a-pentamethyl-1,2,3,4,5,6,7,7a,9,10,11,11b,12,13,13a,13b-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H62O9/c1-31(2)22-10-13-35(7)23(33(22,5)12-11-24(31)45-30-29(42)28(41)27(40)21(17-37)44-30)9-8-19-25-26(32(3,4)43)20(39)16-36(25,18-38)15-14-34(19,35)6/h19-30,37-43H,8-18H2,1-7H3/t19-,20+,21-,22+,23-,24+,25+,26-,27-,28+,29-,30+,33+,34-,35-,36+/m1/s1
InChI Key ULMKHYKZFDWSQM-MXFMHVGLSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C36H62O9
Molecular Weight 638.90 g/mol
Exact Mass 638.43938355 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 2.99
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[[(1S,2S,3aR,5aR,5bR,7aR,9S,11aR,11bR,13aR,13bS)-2-hydroxy-3a-(hydroxymethyl)-1-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a-pentamethyl-1,2,3,4,5,6,7,7a,9,10,11,11b,12,13,13a,13b-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5736 57.36%
Caco-2 - 0.8453 84.53%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6481 64.81%
OATP2B1 inhibitior - 0.5821 58.21%
OATP1B1 inhibitior + 0.8634 86.34%
OATP1B3 inhibitior + 0.9083 90.83%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior - 0.9322 93.22%
P-glycoprotein inhibitior + 0.6728 67.28%
P-glycoprotein substrate - 0.7756 77.56%
CYP3A4 substrate + 0.7318 73.18%
CYP2C9 substrate - 0.7983 79.83%
CYP2D6 substrate - 0.8352 83.52%
CYP3A4 inhibition - 0.9296 92.96%
CYP2C9 inhibition - 0.8614 86.14%
CYP2C19 inhibition - 0.8554 85.54%
CYP2D6 inhibition - 0.9590 95.90%
CYP1A2 inhibition - 0.8858 88.58%
CYP2C8 inhibition + 0.6467 64.67%
CYP inhibitory promiscuity - 0.9626 96.26%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7170 71.70%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9094 90.94%
Skin irritation - 0.7009 70.09%
Skin corrosion - 0.9551 95.51%
Ames mutagenesis - 0.7589 75.89%
Human Ether-a-go-go-Related Gene inhibition + 0.7028 70.28%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7336 73.36%
skin sensitisation - 0.9279 92.79%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7405 74.05%
Acute Oral Toxicity (c) I 0.5615 56.15%
Estrogen receptor binding + 0.5681 56.81%
Androgen receptor binding + 0.7400 74.00%
Thyroid receptor binding - 0.5732 57.32%
Glucocorticoid receptor binding - 0.4688 46.88%
Aromatase binding + 0.6212 62.12%
PPAR gamma + 0.6136 61.36%
Honey bee toxicity - 0.6472 64.72%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.8055 80.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.52% 96.61%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.81% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.08% 96.09%
CHEMBL2996 Q05655 Protein kinase C delta 93.55% 97.79%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 92.69% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.48% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.04% 91.11%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.42% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.63% 92.94%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.94% 96.21%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.75% 93.04%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.81% 100.00%
CHEMBL3589 P55263 Adenosine kinase 85.78% 98.05%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.78% 97.14%
CHEMBL2581 P07339 Cathepsin D 84.87% 98.95%
CHEMBL220 P22303 Acetylcholinesterase 84.65% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.16% 95.50%
CHEMBL259 P32245 Melanocortin receptor 4 83.70% 95.38%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.94% 94.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.92% 95.83%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.64% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 82.55% 95.93%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 82.53% 82.50%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.18% 95.58%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.85% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.77% 92.62%
CHEMBL237 P41145 Kappa opioid receptor 80.57% 98.10%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.30% 96.77%
CHEMBL1937 Q92769 Histone deacetylase 2 80.28% 94.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arenaria filicaulis

Cross-Links

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PubChem 21629380
LOTUS LTS0216698
wikiData Q104667955