(1S,4aS,7aS)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(1R,2'R,5S,11R,12R,15S)-2'-hydroxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

Details

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Internal ID 35971dc0-47c3-4a81-afcd-3ebe560ababb
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name (1S,4aS,7aS)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(1R,2'R,5S,11R,12R,15S)-2'-hydroxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical) CC(C)C1(CCC2(CO1)C3CCC4=C5C2(CC(C5CC4)C(=O)OCC6C(C(C(C(O6)OC7C8C(CC=C8CO)C(=CO7)C(=O)O)O)O)O)CN(C3)C)O
SMILES (Isomeric) CC(C)[C@]1(CC[C@]2(CO1)[C@@H]3CCC4=C5[C@@]2(C[C@H]([C@H]5CC4)C(=O)OC[C@@H]6[C@H]([C@@H]([C@H]([C@@H](O6)O[C@H]7[C@H]8[C@H](CC=C8CO)C(=CO7)C(=O)O)O)O)O)CN(C3)C)O
InChI InChI=1S/C39H55NO13/c1-19(2)39(48)11-10-37(18-51-39)22-7-4-20-5-9-24-25(12-38(37,29(20)24)17-40(3)13-22)34(47)49-16-27-30(42)31(43)32(44)36(52-27)53-35-28-21(14-41)6-8-23(28)26(15-50-35)33(45)46/h6,15,19,22-25,27-28,30-32,35-36,41-44,48H,4-5,7-14,16-18H2,1-3H3,(H,45,46)/t22-,23-,24-,25-,27-,28-,30-,31+,32-,35+,36+,37+,38-,39-/m1/s1
InChI Key LLOSAJLSLUXOSZ-VUVWKRRGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H55NO13
Molecular Weight 745.90 g/mol
Exact Mass 745.36734081 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP -2.60
Atomic LogP (AlogP) 1.44
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,4aS,7aS)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(1R,2'R,5S,11R,12R,15S)-2'-hydroxy-3-methyl-2'-propan-2-ylspiro[3-azatetracyclo[6.5.1.11,5.011,14]pentadec-8(14)-ene-15,5'-oxane]-12-carbonyl]oxymethyl]oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6288 62.88%
Caco-2 - 0.8743 87.43%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5280 52.80%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8126 81.26%
OATP1B3 inhibitior + 0.9182 91.82%
MATE1 inhibitior - 0.9420 94.20%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.4677 46.77%
P-glycoprotein inhibitior + 0.7349 73.49%
P-glycoprotein substrate + 0.6985 69.85%
CYP3A4 substrate + 0.7351 73.51%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8571 85.71%
CYP3A4 inhibition - 0.8135 81.35%
CYP2C9 inhibition - 0.8251 82.51%
CYP2C19 inhibition - 0.8800 88.00%
CYP2D6 inhibition - 0.9507 95.07%
CYP1A2 inhibition - 0.8967 89.67%
CYP2C8 inhibition + 0.6630 66.30%
CYP inhibitory promiscuity - 0.9862 98.62%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Danger 0.4594 45.94%
Eye corrosion - 0.9838 98.38%
Eye irritation - 0.9155 91.55%
Skin irritation - 0.7190 71.90%
Skin corrosion - 0.9222 92.22%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4288 42.88%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.5924 59.24%
skin sensitisation - 0.8513 85.13%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity + 0.5764 57.64%
Acute Oral Toxicity (c) III 0.5790 57.90%
Estrogen receptor binding + 0.8495 84.95%
Androgen receptor binding + 0.7414 74.14%
Thyroid receptor binding - 0.5825 58.25%
Glucocorticoid receptor binding + 0.6540 65.40%
Aromatase binding + 0.6559 65.59%
PPAR gamma + 0.7216 72.16%
Honey bee toxicity - 0.7036 70.36%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.8239 82.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.39% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.18% 97.25%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 97.66% 94.62%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.30% 91.11%
CHEMBL2581 P07339 Cathepsin D 93.70% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.79% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.94% 95.56%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.56% 96.61%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 90.07% 94.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.67% 89.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 89.04% 96.47%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.46% 95.89%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.28% 93.56%
CHEMBL5255 O00206 Toll-like receptor 4 86.89% 92.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.45% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.39% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.12% 99.23%
CHEMBL5028 O14672 ADAM10 85.91% 97.50%
CHEMBL226 P30542 Adenosine A1 receptor 85.12% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.02% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 83.58% 91.19%
CHEMBL2514 O95665 Neurotensin receptor 2 81.53% 100.00%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 81.09% 98.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphniphyllum calycinum

Cross-Links

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PubChem 163040395
LOTUS LTS0050685
wikiData Q105161745