(1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-16-[(2R,3R,4S,5S,6R)-5-hydroxy-6-(hydroxymethyl)-3,4-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-7,9,13-trimethyl-6-[(3R)-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-10-one

Details

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Internal ID be4d3a86-3f8e-453d-8227-a304abed7570
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-16-[(2R,3R,4S,5S,6R)-5-hydroxy-6-(hydroxymethyl)-3,4-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-7,9,13-trimethyl-6-[(3R)-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-10-one
SMILES (Canonical) CC1C2C(CC3C2(C(=O)CC4C3CCC5C4(CCC(C5)OC6C(C(C(C(O6)CO)O)OC7C(C(C(C(O7)CO)O)O)O)OC8C(C(C(C(O8)CO)O)O)O)C)C)OC1(CCC(C)COC9C(C(C(C(O9)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(C(=O)C[C@H]4[C@H]3CC[C@H]5[C@@]4(CC[C@@H](C5)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)C)C)O[C@@]1(CC[C@@H](C)CO[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O
InChI InChI=1S/C51H84O25/c1-19(18-68-45-40(64)37(61)33(57)27(14-52)70-45)7-10-51(67)20(2)32-26(76-51)12-25-23-6-5-21-11-22(8-9-49(21,3)24(23)13-31(56)50(25,32)4)69-48-44(75-47-42(66)39(63)35(59)29(16-54)72-47)43(36(60)30(17-55)73-48)74-46-41(65)38(62)34(58)28(15-53)71-46/h19-30,32-48,52-55,57-67H,5-18H2,1-4H3/t19-,20+,21-,22+,23-,24+,25+,26+,27-,28-,29-,30-,32+,33-,34-,35-,36+,37+,38+,39+,40-,41-,42-,43+,44-,45-,46+,47+,48-,49+,50-,51-/m1/s1
InChI Key GQDPJUITUWFYLJ-GKNSVQSTSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H84O25
Molecular Weight 1097.20 g/mol
Exact Mass 1096.53016816 g/mol
Topological Polar Surface Area (TPSA) 404.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -4.78
H-Bond Acceptor 25
H-Bond Donor 15
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-16-[(2R,3R,4S,5S,6R)-5-hydroxy-6-(hydroxymethyl)-3,4-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-7,9,13-trimethyl-6-[(3R)-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-10-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5734 57.34%
Caco-2 - 0.8839 88.39%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7299 72.99%
OATP2B1 inhibitior - 0.8731 87.31%
OATP1B1 inhibitior + 0.8639 86.39%
OATP1B3 inhibitior + 0.9419 94.19%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.5561 55.61%
P-glycoprotein inhibitior + 0.7430 74.30%
P-glycoprotein substrate + 0.6198 61.98%
CYP3A4 substrate + 0.7414 74.14%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8547 85.47%
CYP3A4 inhibition - 0.9265 92.65%
CYP2C9 inhibition - 0.9261 92.61%
CYP2C19 inhibition - 0.9124 91.24%
CYP2D6 inhibition - 0.9583 95.83%
CYP1A2 inhibition - 0.9264 92.64%
CYP2C8 inhibition + 0.5489 54.89%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9042 90.42%
Skin irritation - 0.6168 61.68%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.8478 84.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7837 78.37%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.7502 75.02%
skin sensitisation - 0.9422 94.22%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.6384 63.84%
Acute Oral Toxicity (c) I 0.7641 76.41%
Estrogen receptor binding + 0.8419 84.19%
Androgen receptor binding + 0.7064 70.64%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.6553 65.53%
Aromatase binding + 0.6546 65.46%
PPAR gamma + 0.7738 77.38%
Honey bee toxicity - 0.6059 60.59%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.8173 81.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.00% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.70% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.78% 97.09%
CHEMBL220 P22303 Acetylcholinesterase 94.55% 94.45%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.45% 96.21%
CHEMBL1937 Q92769 Histone deacetylase 2 91.32% 94.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.12% 94.45%
CHEMBL4302 P08183 P-glycoprotein 1 90.17% 92.98%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.11% 100.00%
CHEMBL4581 P52732 Kinesin-like protein 1 88.93% 93.18%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.02% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.86% 93.56%
CHEMBL5255 O00206 Toll-like receptor 4 85.43% 92.50%
CHEMBL2581 P07339 Cathepsin D 85.39% 98.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 84.73% 97.29%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 83.88% 92.86%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.76% 90.71%
CHEMBL2996 Q05655 Protein kinase C delta 82.78% 97.79%
CHEMBL237 P41145 Kappa opioid receptor 82.15% 98.10%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.12% 95.56%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.63% 91.24%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.11% 100.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 81.01% 96.47%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.98% 98.46%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.75% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.34% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Yucca gigantea

Cross-Links

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PubChem 163001605
LOTUS LTS0016181
wikiData Q105015318