(2R,3R,4R,5R,6S)-2-[[(2R,3R,4S)-6-hydroxy-4-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-5,7-dimethoxy-1,2,3,4-tetrahydronaphthalen-2-yl]methoxy]-6-methyloxane-3,4,5-triol

Details

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Internal ID 6f301253-7b73-430b-abf6-9acd2d094be0
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2R,3R,4R,5R,6S)-2-[[(2R,3R,4S)-6-hydroxy-4-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-5,7-dimethoxy-1,2,3,4-tetrahydronaphthalen-2-yl]methoxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H38O12/c1-12-22(30)25(33)26(34)28(40-12)39-11-15-6-13-7-19(37-4)24(32)27(38-5)21(13)20(16(15)10-29)14-8-17(35-2)23(31)18(9-14)36-3/h7-9,12,15-16,20,22,25-26,28-34H,6,10-11H2,1-5H3/t12-,15-,16-,20+,22-,25+,26+,28+/m0/s1
InChI Key YWLQUZKKMCXLMD-ONDOEPAXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H38O12
Molecular Weight 566.60 g/mol
Exact Mass 566.23632664 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 0.89
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4R,5R,6S)-2-[[(2R,3R,4S)-6-hydroxy-4-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-5,7-dimethoxy-1,2,3,4-tetrahydronaphthalen-2-yl]methoxy]-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5683 56.83%
Caco-2 - 0.8153 81.53%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.5772 57.72%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8045 80.45%
OATP1B3 inhibitior + 0.9489 94.89%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6254 62.54%
P-glycoprotein inhibitior - 0.4919 49.19%
P-glycoprotein substrate - 0.5381 53.81%
CYP3A4 substrate + 0.6090 60.90%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.7682 76.82%
CYP3A4 inhibition - 0.8405 84.05%
CYP2C9 inhibition - 0.8189 81.89%
CYP2C19 inhibition - 0.7675 76.75%
CYP2D6 inhibition - 0.8956 89.56%
CYP1A2 inhibition - 0.6935 69.35%
CYP2C8 inhibition + 0.5898 58.98%
CYP inhibitory promiscuity + 0.6067 60.67%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6637 66.37%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9314 93.14%
Skin irritation - 0.8325 83.25%
Skin corrosion - 0.9549 95.49%
Ames mutagenesis - 0.6254 62.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7067 70.67%
Micronuclear + 0.6400 64.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9143 91.43%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.9348 93.48%
Acute Oral Toxicity (c) III 0.6174 61.74%
Estrogen receptor binding + 0.7827 78.27%
Androgen receptor binding + 0.6632 66.32%
Thyroid receptor binding + 0.6117 61.17%
Glucocorticoid receptor binding + 0.6331 63.31%
Aromatase binding + 0.5612 56.12%
PPAR gamma + 0.5622 56.22%
Honey bee toxicity - 0.8100 81.00%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.9024 90.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.64% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.41% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.51% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.85% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.85% 92.94%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.98% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.19% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.78% 99.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.56% 85.14%
CHEMBL2581 P07339 Cathepsin D 86.65% 98.95%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 86.58% 89.62%
CHEMBL3714130 P46095 G-protein coupled receptor 6 86.04% 97.36%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.24% 92.62%
CHEMBL3401 O75469 Pregnane X receptor 83.57% 94.73%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.29% 96.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.04% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.89% 95.89%
CHEMBL4208 P20618 Proteasome component C5 81.00% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162891724
LOTUS LTS0237241
wikiData Q105366903