(2R,3R,4S,5S,6R)-2-[[(3S,4aR,6aR,6aR,6bR,8aR,12S,12aR,14aR,14bR)-4,4,6a,6b,8a,12,14b-heptamethyl-11-methylidene-1,2,3,4a,5,6,6a,7,8,9,10,12,12a,13,14,14a-hexadecahydropicen-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID e26f3e6d-5526-4f0d-9122-7ba2021c77f6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[[(3S,4aR,6aR,6aR,6bR,8aR,12S,12aR,14aR,14bR)-4,4,6a,6b,8a,12,14b-heptamethyl-11-methylidene-1,2,3,4a,5,6,6a,7,8,9,10,12,12a,13,14,14a-hexadecahydropicen-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C2C3CCC4C5(CCC(C(C5CCC4(C3(CCC2(CCC1=C)C)C)C)(C)C)OC6C(C(C(C(O6)CO)O)O)O)C
SMILES (Isomeric) C[C@H]1[C@@H]2[C@H]3CC[C@@H]4[C@]5(CC[C@@H](C([C@@H]5CC[C@]4([C@@]3(CC[C@]2(CCC1=C)C)C)C)(C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C
InChI InChI=1S/C36H60O6/c1-20-11-14-33(5)17-18-35(7)22(27(33)21(20)2)9-10-25-34(6)15-13-26(32(3,4)24(34)12-16-36(25,35)8)42-31-30(40)29(39)28(38)23(19-37)41-31/h21-31,37-40H,1,9-19H2,2-8H3/t21-,22-,23-,24+,25-,26+,27-,28-,29+,30-,31+,33-,34+,35-,36-/m1/s1
InChI Key GFKWSVKOIMSPHC-AQXOSQMUSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C36H60O6
Molecular Weight 588.90 g/mol
Exact Mass 588.43898963 g/mol
Topological Polar Surface Area (TPSA) 99.40 Ų
XlogP 7.50
Atomic LogP (AlogP) 5.85
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[[(3S,4aR,6aR,6aR,6bR,8aR,12S,12aR,14aR,14bR)-4,4,6a,6b,8a,12,14b-heptamethyl-11-methylidene-1,2,3,4a,5,6,6a,7,8,9,10,12,12a,13,14,14a-hexadecahydropicen-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7146 71.46%
Caco-2 - 0.8187 81.87%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7580 75.80%
OATP2B1 inhibitior - 0.5781 57.81%
OATP1B1 inhibitior + 0.8316 83.16%
OATP1B3 inhibitior - 0.2508 25.08%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior - 0.7970 79.70%
P-glycoprotein inhibitior + 0.6571 65.71%
P-glycoprotein substrate - 0.8175 81.75%
CYP3A4 substrate + 0.7180 71.80%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.8268 82.68%
CYP2C9 inhibition - 0.7517 75.17%
CYP2C19 inhibition - 0.7748 77.48%
CYP2D6 inhibition - 0.9354 93.54%
CYP1A2 inhibition - 0.7255 72.55%
CYP2C8 inhibition + 0.5982 59.82%
CYP inhibitory promiscuity - 0.8730 87.30%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7400 74.00%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9255 92.55%
Skin irritation - 0.6373 63.73%
Skin corrosion - 0.9489 94.89%
Ames mutagenesis - 0.7524 75.24%
Human Ether-a-go-go-Related Gene inhibition + 0.8137 81.37%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.8821 88.21%
skin sensitisation - 0.8742 87.42%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity - 0.7000 70.00%
Nephrotoxicity - 0.8096 80.96%
Acute Oral Toxicity (c) III 0.7135 71.35%
Estrogen receptor binding + 0.5633 56.33%
Androgen receptor binding + 0.7407 74.07%
Thyroid receptor binding - 0.5494 54.94%
Glucocorticoid receptor binding + 0.5489 54.89%
Aromatase binding + 0.6660 66.60%
PPAR gamma + 0.6086 60.86%
Honey bee toxicity - 0.6983 69.83%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9787 97.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL241 Q14432 Phosphodiesterase 3A 94.62% 92.94%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.94% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.03% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.92% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.37% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.96% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.83% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.76% 97.25%
CHEMBL237 P41145 Kappa opioid receptor 86.51% 98.10%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.81% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.57% 94.00%
CHEMBL2581 P07339 Cathepsin D 83.53% 98.95%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.74% 91.24%
CHEMBL3589 P55263 Adenosine kinase 81.67% 98.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.50% 94.45%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 81.48% 95.58%
CHEMBL1977 P11473 Vitamin D receptor 80.36% 99.43%
CHEMBL5555 O00767 Acyl-CoA desaturase 80.30% 97.50%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 80.24% 82.50%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.16% 95.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.01% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cichorium pumilum

Cross-Links

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PubChem 101494875
LOTUS LTS0246463
wikiData Q105007604