Phlorigidoside A

Details

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Internal ID 52712ae1-7c12-445c-abc8-5473934eb248
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aS,5S,6S,7R,7aS)-1-[(2S,3R,4S,5S,6R)-3-acetyloxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,6,7-trihydroxy-7-methyl-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H28O13/c1-6(21)30-14-13(24)11(22)8(4-20)31-18(14)32-17-10-9(7(5-29-17)16(26)28-3)12(23)15(25)19(10,2)27/h5,8-15,17-18,20,22-25,27H,4H2,1-3H3/t8-,9-,10-,11-,12+,13+,14-,15+,17+,18+,19-/m1/s1
InChI Key NPSNYEVBZIRVFW-FXYXNRIXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C19H28O13
Molecular Weight 464.40 g/mol
Exact Mass 464.15299094 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP -3.00
Atomic LogP (AlogP) -3.49
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Phlorigidoside A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5752 57.52%
Caco-2 - 0.8586 85.86%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6976 69.76%
OATP2B1 inhibitior - 0.8623 86.23%
OATP1B1 inhibitior + 0.7153 71.53%
OATP1B3 inhibitior + 0.9383 93.83%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.8767 87.67%
P-glycoprotein inhibitior - 0.6698 66.98%
P-glycoprotein substrate - 0.7072 70.72%
CYP3A4 substrate + 0.6499 64.99%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8904 89.04%
CYP3A4 inhibition - 0.9175 91.75%
CYP2C9 inhibition - 0.9119 91.19%
CYP2C19 inhibition - 0.9053 90.53%
CYP2D6 inhibition - 0.9354 93.54%
CYP1A2 inhibition - 0.9210 92.10%
CYP2C8 inhibition - 0.6640 66.40%
CYP inhibitory promiscuity - 0.8401 84.01%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6290 62.90%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9334 93.34%
Skin irritation - 0.7250 72.50%
Skin corrosion - 0.9477 94.77%
Ames mutagenesis - 0.5237 52.37%
Human Ether-a-go-go-Related Gene inhibition - 0.6069 60.69%
Micronuclear - 0.5841 58.41%
Hepatotoxicity - 0.6848 68.48%
skin sensitisation - 0.8659 86.59%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.7183 71.83%
Acute Oral Toxicity (c) III 0.4778 47.78%
Estrogen receptor binding + 0.6902 69.02%
Androgen receptor binding - 0.5240 52.40%
Thyroid receptor binding - 0.5261 52.61%
Glucocorticoid receptor binding - 0.5715 57.15%
Aromatase binding + 0.5418 54.18%
PPAR gamma - 0.5873 58.73%
Honey bee toxicity - 0.7729 77.29%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity - 0.4230 42.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.94% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.22% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.49% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 90.22% 94.73%
CHEMBL4208 P20618 Proteasome component C5 85.96% 90.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.47% 86.92%
CHEMBL5255 O00206 Toll-like receptor 4 84.75% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.65% 86.33%
CHEMBL2581 P07339 Cathepsin D 83.08% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.98% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.69% 96.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.31% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phlomis rigida

Cross-Links

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PubChem 102237726
LOTUS LTS0160749
wikiData Q105183371