[(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-oxo-1-[(2R,3S,4R)-2,3,4,5-tetrahydroxypentoxy]pentan-2-yl]oxy-1-oxopentan-2-yl]oxy-1-oxopentan-2-yl] (2R,3S)-2-hydroxy-3-methylpentanoate

Details

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Internal ID 0a1cbe65-a7f9-4e43-bfc2-056926ee38d7
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides
IUPAC Name [(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-oxo-1-[(2R,3S,4R)-2,3,4,5-tetrahydroxypentoxy]pentan-2-yl]oxy-1-oxopentan-2-yl]oxy-1-oxopentan-2-yl] (2R,3S)-2-hydroxy-3-methylpentanoate
SMILES (Canonical) CCC(C)C(C(=O)OC(C(C)CC)C(=O)OC(C(C)CC)C(=O)OC(C(C)CC)C(=O)OCC(C(C(CO)O)O)O)O
SMILES (Isomeric) CC[C@H](C)[C@H](C(=O)O[C@H]([C@@H](C)CC)C(=O)O[C@H]([C@@H](C)CC)C(=O)O[C@H]([C@@H](C)CC)C(=O)OC[C@H]([C@H]([C@@H](CO)O)O)O)O
InChI InChI=1S/C29H52O13/c1-9-15(5)21(33)26(35)40-24(17(7)11-3)28(37)42-25(18(8)12-4)29(38)41-23(16(6)10-2)27(36)39-14-20(32)22(34)19(31)13-30/h15-25,30-34H,9-14H2,1-8H3/t15-,16-,17-,18-,19+,20+,21+,22-,23+,24+,25+/m0/s1
InChI Key MDKMYANJMGYULB-RWIOIQJPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C29H52O13
Molecular Weight 608.70 g/mol
Exact Mass 608.34079171 g/mol
Topological Polar Surface Area (TPSA) 206.00 Ų
XlogP 3.60
Atomic LogP (AlogP) 0.89
H-Bond Acceptor 13
H-Bond Donor 5
Rotatable Bonds 20

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-[(2R,3S)-3-methyl-1-oxo-1-[(2R,3S,4R)-2,3,4,5-tetrahydroxypentoxy]pentan-2-yl]oxy-1-oxopentan-2-yl]oxy-1-oxopentan-2-yl] (2R,3S)-2-hydroxy-3-methylpentanoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4614 46.14%
Caco-2 - 0.8430 84.30%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7635 76.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9178 91.78%
OATP1B3 inhibitior + 0.9343 93.43%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7126 71.26%
P-glycoprotein inhibitior + 0.6387 63.87%
P-glycoprotein substrate - 0.8143 81.43%
CYP3A4 substrate - 0.5189 51.89%
CYP2C9 substrate - 0.6031 60.31%
CYP2D6 substrate - 0.8585 85.85%
CYP3A4 inhibition - 0.8097 80.97%
CYP2C9 inhibition - 0.8705 87.05%
CYP2C19 inhibition - 0.8827 88.27%
CYP2D6 inhibition - 0.9163 91.63%
CYP1A2 inhibition - 0.8443 84.43%
CYP2C8 inhibition - 0.8991 89.91%
CYP inhibitory promiscuity - 0.9691 96.91%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.7417 74.17%
Eye corrosion - 0.9735 97.35%
Eye irritation - 0.9145 91.45%
Skin irritation - 0.9099 90.99%
Skin corrosion - 0.9783 97.83%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4780 47.80%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.7968 79.68%
skin sensitisation - 0.9357 93.57%
Respiratory toxicity - 0.6667 66.67%
Reproductive toxicity - 0.8667 86.67%
Mitochondrial toxicity - 0.7625 76.25%
Nephrotoxicity + 0.5661 56.61%
Acute Oral Toxicity (c) III 0.4962 49.62%
Estrogen receptor binding + 0.7552 75.52%
Androgen receptor binding + 0.5590 55.90%
Thyroid receptor binding - 0.5755 57.55%
Glucocorticoid receptor binding + 0.6200 62.00%
Aromatase binding + 0.6040 60.40%
PPAR gamma + 0.5717 57.17%
Honey bee toxicity - 0.9360 93.60%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity - 0.4823 48.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.92% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.80% 98.95%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 90.95% 98.75%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.80% 97.25%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 89.51% 96.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 88.97% 97.29%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 86.15% 100.00%
CHEMBL4015 P41597 C-C chemokine receptor type 2 84.23% 98.57%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.54% 99.17%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 81.67% 97.21%
CHEMBL2885 P07451 Carbonic anhydrase III 81.61% 87.45%
CHEMBL4072 P07858 Cathepsin B 81.58% 93.67%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 80.83% 96.47%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 137637404
LOTUS LTS0014625
wikiData Q105161818