3-[(3S,5S,8R,9S,10R,13R,14S,17R)-3-[(2R,3R,4S,5R)-5-[(1R)-1,2-dihydroxyethyl]-3,4-dihydroxyoxolan-2-yl]oxy-5,14-dihydroxy-10-(hydroxymethyl)-13-methyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

Details

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Internal ID af07643a-909f-494b-92f2-782974034b0c
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name 3-[(3S,5S,8R,9S,10R,13R,14S,17R)-3-[(2R,3R,4S,5R)-5-[(1R)-1,2-dihydroxyethyl]-3,4-dihydroxyoxolan-2-yl]oxy-5,14-dihydroxy-10-(hydroxymethyl)-13-methyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H44O11/c1-26-6-3-18-19(29(26,37)9-5-17(26)15-10-21(33)38-13-15)4-8-28(36)11-16(2-7-27(18,28)14-31)39-25-23(35)22(34)24(40-25)20(32)12-30/h10,16-20,22-25,30-32,34-37H,2-9,11-14H2,1H3/t16-,17+,18-,19+,20+,22-,23+,24+,25+,26+,27-,28-,29-/m0/s1
InChI Key FMYXGOJKLZATHY-GCYYCFFWSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H44O11
Molecular Weight 568.70 g/mol
Exact Mass 568.28836222 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -0.48
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(3S,5S,8R,9S,10R,13R,14S,17R)-3-[(2R,3R,4S,5R)-5-[(1R)-1,2-dihydroxyethyl]-3,4-dihydroxyoxolan-2-yl]oxy-5,14-dihydroxy-10-(hydroxymethyl)-13-methyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9012 90.12%
Caco-2 - 0.8769 87.69%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.8158 81.58%
OATP2B1 inhibitior - 0.6159 61.59%
OATP1B1 inhibitior + 0.9263 92.63%
OATP1B3 inhibitior + 0.9488 94.88%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.7186 71.86%
P-glycoprotein inhibitior - 0.5091 50.91%
P-glycoprotein substrate + 0.5462 54.62%
CYP3A4 substrate + 0.7015 70.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9010 90.10%
CYP3A4 inhibition - 0.9421 94.21%
CYP2C9 inhibition - 0.8843 88.43%
CYP2C19 inhibition - 0.8817 88.17%
CYP2D6 inhibition - 0.9240 92.40%
CYP1A2 inhibition - 0.8939 89.39%
CYP2C8 inhibition - 0.6005 60.05%
CYP inhibitory promiscuity - 0.9054 90.54%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5354 53.54%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9393 93.93%
Skin irritation - 0.5900 59.00%
Skin corrosion - 0.9422 94.22%
Ames mutagenesis - 0.6870 68.70%
Human Ether-a-go-go-Related Gene inhibition + 0.8941 89.41%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6717 67.17%
skin sensitisation - 0.9149 91.49%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.6851 68.51%
Acute Oral Toxicity (c) I 0.5859 58.59%
Estrogen receptor binding + 0.8125 81.25%
Androgen receptor binding + 0.8090 80.90%
Thyroid receptor binding - 0.6243 62.43%
Glucocorticoid receptor binding + 0.5565 55.65%
Aromatase binding + 0.7240 72.40%
PPAR gamma - 0.4854 48.54%
Honey bee toxicity - 0.7667 76.67%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9657 96.57%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.39% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.13% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.02% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.58% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.99% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.76% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.68% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.95% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.71% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.39% 86.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 86.53% 96.77%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 85.22% 93.04%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.48% 95.56%
CHEMBL4208 P20618 Proteasome component C5 84.04% 90.00%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 83.39% 94.23%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.44% 97.14%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.65% 96.95%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.34% 92.86%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.19% 92.62%
CHEMBL226 P30542 Adenosine A1 receptor 80.43% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Coronilla scorpioides
Philotheca tomentella

Cross-Links

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PubChem 162951733
LOTUS LTS0011377
wikiData Q104989557