9-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one

Details

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Internal ID 02fce574-f1df-40c0-9bd3-445f9edfd1e0
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleosides > Purine 2-deoxyribonucleosides
IUPAC Name 9-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C10H12N4O4/c15-2-6-5(16)1-7(18-6)14-4-13-8-9(14)11-3-12-10(8)17/h3-7,15-16H,1-2H2,(H,11,12,17)
InChI Key VGONTNSXDCQUGY-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C10H12N4O4
Molecular Weight 252.23 g/mol
Exact Mass 252.08585488 g/mol
Topological Polar Surface Area (TPSA) 109.00 Ų
XlogP -1.70
Atomic LogP (AlogP) -1.24
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 9-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9618 96.18%
Caco-2 - 0.9566 95.66%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Nucleus 0.6043 60.43%
OATP2B1 inhibitior - 0.8652 86.52%
OATP1B1 inhibitior + 0.9388 93.88%
OATP1B3 inhibitior + 0.9443 94.43%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9214 92.14%
P-glycoprotein inhibitior - 0.9418 94.18%
P-glycoprotein substrate - 0.8908 89.08%
CYP3A4 substrate - 0.5241 52.41%
CYP2C9 substrate - 0.5995 59.95%
CYP2D6 substrate - 0.8575 85.75%
CYP3A4 inhibition - 0.9682 96.82%
CYP2C9 inhibition - 0.9531 95.31%
CYP2C19 inhibition - 0.9678 96.78%
CYP2D6 inhibition - 0.9552 95.52%
CYP1A2 inhibition - 0.9127 91.27%
CYP2C8 inhibition - 0.8937 89.37%
CYP inhibitory promiscuity - 0.8952 89.52%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6261 62.61%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9458 94.58%
Skin irritation - 0.7917 79.17%
Skin corrosion - 0.9434 94.34%
Ames mutagenesis + 0.5609 56.09%
Human Ether-a-go-go-Related Gene inhibition - 0.7468 74.68%
Micronuclear + 0.9700 97.00%
Hepatotoxicity + 0.7828 78.28%
skin sensitisation - 0.8927 89.27%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.7112 71.12%
Acute Oral Toxicity (c) III 0.5275 52.75%
Estrogen receptor binding - 0.5589 55.89%
Androgen receptor binding + 0.6302 63.02%
Thyroid receptor binding + 0.6455 64.55%
Glucocorticoid receptor binding + 0.5947 59.47%
Aromatase binding + 0.6017 60.17%
PPAR gamma + 0.7111 71.11%
Honey bee toxicity - 0.8010 80.10%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity - 0.7171 71.71%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.56% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.32% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.53% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.55% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.44% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.30% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 89.28% 94.75%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.07% 99.23%
CHEMBL3038469 P24941 CDK2/Cyclin A 87.98% 91.38%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.80% 89.00%
CHEMBL2581 P07339 Cathepsin D 86.72% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.39% 86.92%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.86% 95.83%
CHEMBL226 P30542 Adenosine A1 receptor 83.63% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.36% 86.33%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 83.28% 80.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.18% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 82.12% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.50% 95.89%
CHEMBL4040 P28482 MAP kinase ERK2 80.21% 83.82%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 80.15% 92.88%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 639
LOTUS LTS0215978
wikiData Q105285938