(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(2,6,6-trimethylcyclohexen-1-yl)methoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol

Details

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Internal ID e488301d-1305-4e3e-b9a6-a9254e4b002a
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(2,6,6-trimethylcyclohexen-1-yl)methoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol
SMILES (Canonical) CC1=C(C(CCC1)(C)C)COC2C(C(C(C(O2)COC3C(C(C(C(O3)CO)O)O)O)O)O)O
SMILES (Isomeric) CC1=C(C(CCC1)(C)C)CO[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O
InChI InChI=1S/C22H38O11/c1-10-5-4-6-22(2,3)11(10)8-30-20-19(29)17(27)15(25)13(33-20)9-31-21-18(28)16(26)14(24)12(7-23)32-21/h12-21,23-29H,4-9H2,1-3H3/t12-,13-,14-,15-,16+,17+,18-,19-,20-,21-/m1/s1
InChI Key WFJDTYSQBHCNGC-LWZURRPWSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C22H38O11
Molecular Weight 478.50 g/mol
Exact Mass 478.24141202 g/mol
Topological Polar Surface Area (TPSA) 179.00 Ų
XlogP -1.80
Atomic LogP (AlogP) -1.85
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 7

Synonyms

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BDBM50608222

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(2,6,6-trimethylcyclohexen-1-yl)methoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6452 64.52%
Caco-2 - 0.8076 80.76%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.8570 85.70%
OATP2B1 inhibitior - 0.8611 86.11%
OATP1B1 inhibitior + 0.8497 84.97%
OATP1B3 inhibitior - 0.2606 26.06%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.6808 68.08%
P-glycoprotein inhibitior - 0.7207 72.07%
P-glycoprotein substrate - 0.9212 92.12%
CYP3A4 substrate + 0.5946 59.46%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8388 83.88%
CYP3A4 inhibition - 0.9568 95.68%
CYP2C9 inhibition - 0.8405 84.05%
CYP2C19 inhibition - 0.8671 86.71%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.8936 89.36%
CYP2C8 inhibition - 0.6918 69.18%
CYP inhibitory promiscuity - 0.9241 92.41%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6695 66.95%
Eye corrosion - 0.9890 98.90%
Eye irritation - 0.9443 94.43%
Skin irritation - 0.7395 73.95%
Skin corrosion - 0.9599 95.99%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4284 42.84%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.6726 67.26%
skin sensitisation - 0.8701 87.01%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity + 0.4549 45.49%
Acute Oral Toxicity (c) III 0.6621 66.21%
Estrogen receptor binding - 0.5667 56.67%
Androgen receptor binding - 0.5327 53.27%
Thyroid receptor binding - 0.4910 49.10%
Glucocorticoid receptor binding - 0.5422 54.22%
Aromatase binding + 0.6727 67.27%
PPAR gamma + 0.5469 54.69%
Honey bee toxicity - 0.8436 84.36%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.9263 92.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.16% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.25% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.95% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.96% 97.25%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.35% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.86% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.73% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.68% 95.89%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.31% 92.62%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.68% 100.00%
CHEMBL2581 P07339 Cathepsin D 82.67% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 82.62% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 81.62% 94.73%
CHEMBL1937 Q92769 Histone deacetylase 2 81.26% 94.75%
CHEMBL218 P21554 Cannabinoid CB1 receptor 80.85% 96.61%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.15% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nelumbo nucifera

Cross-Links

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PubChem 102169927
LOTUS LTS0154578
wikiData Q105303947