[(2R,3S,4R,5R,6R)-4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl] (1R,4aS,6S,7R,7aS)-6-[(1R,4aS,7S,7aR)-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

Details

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Internal ID c808df73-e0af-4a81-a846-e98154013cd0
Taxonomy Lipids and lipid-like molecules > Saccharolipids
IUPAC Name [(2R,3S,4R,5R,6R)-4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl] (1R,4aS,6S,7R,7aS)-6-[(1R,4aS,7S,7aR)-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H36O13/c1-9-3-4-11-13(7-35-24(32)17(9)11)22(30)37-15-5-12-14(8-36-25(33)18(12)10(15)2)23(31)39-21-16(6-27)38-26(34)20(29)19(21)28/h7-12,15-21,24-29,32-34H,3-6H2,1-2H3/t9-,10-,11+,12+,15-,16+,17+,18+,19+,20+,21+,24+,25+,26+/m0/s1
InChI Key GRBFZZYLGGPJJX-ZKMAZUDRSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C26H36O13
Molecular Weight 556.60 g/mol
Exact Mass 556.21559120 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -1.36
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3S,4R,5R,6R)-4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl] (1R,4aS,6S,7R,7aS)-6-[(1R,4aS,7S,7aR)-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carbonyl]oxy-1-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5794 57.94%
Caco-2 - 0.8783 87.83%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.7703 77.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7244 72.44%
OATP1B3 inhibitior + 0.9355 93.55%
MATE1 inhibitior - 0.9212 92.12%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6247 62.47%
P-glycoprotein inhibitior - 0.5384 53.84%
P-glycoprotein substrate - 0.6679 66.79%
CYP3A4 substrate + 0.6423 64.23%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8600 86.00%
CYP3A4 inhibition - 0.8321 83.21%
CYP2C9 inhibition - 0.8696 86.96%
CYP2C19 inhibition - 0.9078 90.78%
CYP2D6 inhibition - 0.9045 90.45%
CYP1A2 inhibition - 0.7570 75.70%
CYP2C8 inhibition + 0.5432 54.32%
CYP inhibitory promiscuity - 0.8116 81.16%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6832 68.32%
Eye corrosion - 0.9890 98.90%
Eye irritation - 0.9264 92.64%
Skin irritation - 0.6229 62.29%
Skin corrosion - 0.9338 93.38%
Ames mutagenesis - 0.6195 61.95%
Human Ether-a-go-go-Related Gene inhibition - 0.6053 60.53%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.5243 52.43%
skin sensitisation - 0.8930 89.30%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.7372 73.72%
Acute Oral Toxicity (c) III 0.5791 57.91%
Estrogen receptor binding + 0.7846 78.46%
Androgen receptor binding + 0.6470 64.70%
Thyroid receptor binding - 0.5559 55.59%
Glucocorticoid receptor binding + 0.5421 54.21%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6278 62.78%
Honey bee toxicity - 0.8609 86.09%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.8592 85.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.37% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 95.68% 83.82%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.41% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.23% 91.11%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 91.53% 86.92%
CHEMBL226 P30542 Adenosine A1 receptor 91.11% 95.93%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 86.37% 94.80%
CHEMBL5255 O00206 Toll-like receptor 4 86.27% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.07% 86.33%
CHEMBL2581 P07339 Cathepsin D 84.25% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.06% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 82.99% 94.73%
CHEMBL2996 Q05655 Protein kinase C delta 82.48% 97.79%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.53% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.19% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.14% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Viburnum urceolatum

Cross-Links

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PubChem 163008612
LOTUS LTS0144587
wikiData Q105015689