(2R)-2-[(1R)-1-[(8S,9S,10R,13S,14S,17R)-10,13-dimethyl-1-oxo-4,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxyethyl]-5-(methoxymethyl)-4-methyl-2,3-dihydropyran-6-one

Details

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Internal ID 56f12175-05ef-48a2-9f25-255668103cfb
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (2R)-2-[(1R)-1-[(8S,9S,10R,13S,14S,17R)-10,13-dimethyl-1-oxo-4,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxyethyl]-5-(methoxymethyl)-4-methyl-2,3-dihydropyran-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H40O5/c1-17-14-25(34-27(32)21(17)16-33-4)20(15-30)23-11-10-22-19-9-8-18-6-5-7-26(31)29(18,3)24(19)12-13-28(22,23)2/h5,7-8,19-20,22-25,30H,6,9-16H2,1-4H3/t19-,20-,22-,23+,24-,25+,28-,29-/m0/s1
InChI Key IJXBMSZEDRDWOR-FHTCHLKZSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C29H40O5
Molecular Weight 468.60 g/mol
Exact Mass 468.28757437 g/mol
Topological Polar Surface Area (TPSA) 72.80 Ų
XlogP 4.40
Atomic LogP (AlogP) 4.80
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R)-2-[(1R)-1-[(8S,9S,10R,13S,14S,17R)-10,13-dimethyl-1-oxo-4,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxyethyl]-5-(methoxymethyl)-4-methyl-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9403 94.03%
Caco-2 - 0.6201 62.01%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7690 76.90%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8678 86.78%
OATP1B3 inhibitior + 0.9411 94.11%
MATE1 inhibitior - 0.9212 92.12%
OCT2 inhibitior - 0.5771 57.71%
BSEP inhibitior + 0.9922 99.22%
P-glycoprotein inhibitior + 0.7575 75.75%
P-glycoprotein substrate + 0.5850 58.50%
CYP3A4 substrate + 0.7600 76.00%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9075 90.75%
CYP3A4 inhibition - 0.6983 69.83%
CYP2C9 inhibition - 0.9277 92.77%
CYP2C19 inhibition - 0.9147 91.47%
CYP2D6 inhibition - 0.9517 95.17%
CYP1A2 inhibition - 0.7169 71.69%
CYP2C8 inhibition + 0.6581 65.81%
CYP inhibitory promiscuity - 0.9318 93.18%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6268 62.68%
Eye corrosion - 0.9886 98.86%
Eye irritation - 0.9700 97.00%
Skin irritation - 0.5639 56.39%
Skin corrosion - 0.9466 94.66%
Ames mutagenesis - 0.7014 70.14%
Human Ether-a-go-go-Related Gene inhibition + 0.7201 72.01%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.5872 58.72%
skin sensitisation - 0.8859 88.59%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.6456 64.56%
Acute Oral Toxicity (c) III 0.4923 49.23%
Estrogen receptor binding + 0.8041 80.41%
Androgen receptor binding + 0.7598 75.98%
Thyroid receptor binding + 0.5459 54.59%
Glucocorticoid receptor binding + 0.8966 89.66%
Aromatase binding + 0.6591 65.91%
PPAR gamma + 0.5649 56.49%
Honey bee toxicity - 0.7184 71.84%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9364 93.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.92% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.34% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.57% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.53% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.67% 91.11%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 90.45% 97.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.18% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.99% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.47% 86.33%
CHEMBL204 P00734 Thrombin 86.18% 96.01%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.49% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.40% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.10% 97.25%
CHEMBL1937 Q92769 Histone deacetylase 2 83.63% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.00% 89.00%
CHEMBL1871 P10275 Androgen Receptor 82.70% 96.43%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.62% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.45% 99.17%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.33% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Datura metel

Cross-Links

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PubChem 11762427
NPASS NPC240585
LOTUS LTS0117654
wikiData Q105114193