(4S,5S)-2-[[3-[[(3S)-3-amino-6-[[(3S)-3-amino-6-[[(3S)-3,6-diaminohexanoyl]amino]hexanoyl]amino]hexanoyl]amino]-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]amino]-5-[(1R)-2-amino-1-hydroxyethyl]-4,5-dihydro-1H-imidazole-4-carboxylic acid

Details

Top
Internal ID 69209cc9-73a5-4946-974f-cf4f2388e88e
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name (4S,5S)-2-[[3-[[(3S)-3-amino-6-[[(3S)-3-amino-6-[[(3S)-3,6-diaminohexanoyl]amino]hexanoyl]amino]hexanoyl]amino]-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]amino]-5-[(1R)-2-amino-1-hydroxyethyl]-4,5-dihydro-1H-imidazole-4-carboxylic acid
SMILES (Canonical) C(CC(CC(=O)NCCCC(CC(=O)NCCCC(CC(=O)NC1C(C(C(OC1NC2=NC(C(N2)C(CN)O)C(=O)O)CO)OC(=O)N)O)N)N)N)CN
SMILES (Isomeric) C(C[C@@H](CC(=O)NCCC[C@@H](CC(=O)NCCC[C@@H](CC(=O)NC1C(C(C(OC1NC2=N[C@@H]([C@H](N2)[C@@H](CN)O)C(=O)O)CO)OC(=O)N)O)N)N)N)CN
InChI InChI=1S/C31H60N12O11/c32-7-1-4-15(34)10-20(46)38-8-2-5-16(35)11-21(47)39-9-3-6-17(36)12-22(48)40-25-26(49)27(54-30(37)52)19(14-44)53-28(25)43-31-41-23(18(45)13-33)24(42-31)29(50)51/h15-19,23-28,44-45,49H,1-14,32-36H2,(H2,37,52)(H,38,46)(H,39,47)(H,40,48)(H,50,51)(H2,41,42,43)/t15-,16-,17-,18+,19?,23+,24-,25?,26?,27?,28?/m0/s1
InChI Key DLWGZGTWTREZQM-VMFYMWMNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C31H60N12O11
Molecular Weight 776.90 g/mol
Exact Mass 776.45045078 g/mol
Topological Polar Surface Area (TPSA) 413.00 Ų
XlogP -10.00
Atomic LogP (AlogP) -6.61
H-Bond Acceptor 18
H-Bond Donor 15
Rotatable Bonds 24

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (4S,5S)-2-[[3-[[(3S)-3-amino-6-[[(3S)-3-amino-6-[[(3S)-3,6-diaminohexanoyl]amino]hexanoyl]amino]hexanoyl]amino]-5-carbamoyloxy-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]amino]-5-[(1R)-2-amino-1-hydroxyethyl]-4,5-dihydro-1H-imidazole-4-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7152 71.52%
Caco-2 - 0.8637 86.37%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.4514 45.14%
OATP2B1 inhibitior - 0.7177 71.77%
OATP1B1 inhibitior + 0.8682 86.82%
OATP1B3 inhibitior + 0.9428 94.28%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.6547 65.47%
P-glycoprotein inhibitior + 0.7283 72.83%
P-glycoprotein substrate + 0.7200 72.00%
CYP3A4 substrate + 0.6782 67.82%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8207 82.07%
CYP3A4 inhibition - 0.9808 98.08%
CYP2C9 inhibition - 0.9326 93.26%
CYP2C19 inhibition - 0.9190 91.90%
CYP2D6 inhibition - 0.9273 92.73%
CYP1A2 inhibition - 0.8779 87.79%
CYP2C8 inhibition + 0.5851 58.51%
CYP inhibitory promiscuity - 0.9914 99.14%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6315 63.15%
Eye corrosion - 0.9848 98.48%
Eye irritation - 0.9018 90.18%
Skin irritation - 0.7541 75.41%
Skin corrosion - 0.9217 92.17%
Ames mutagenesis - 0.6770 67.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4832 48.32%
Micronuclear + 0.8000 80.00%
Hepatotoxicity - 0.7568 75.68%
skin sensitisation - 0.8185 81.85%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.6104 61.04%
Acute Oral Toxicity (c) III 0.5282 52.82%
Estrogen receptor binding + 0.7606 76.06%
Androgen receptor binding + 0.6703 67.03%
Thyroid receptor binding + 0.5180 51.80%
Glucocorticoid receptor binding + 0.5598 55.98%
Aromatase binding + 0.6647 66.47%
PPAR gamma + 0.6982 69.82%
Honey bee toxicity - 0.6961 69.61%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity - 0.8740 87.40%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.14% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.43% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.51% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.03% 99.17%
CHEMBL2581 P07339 Cathepsin D 94.24% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.94% 94.45%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 93.57% 96.21%
CHEMBL2094135 Q96BI3 Gamma-secretase 93.55% 98.05%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 91.63% 85.00%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 89.45% 82.86%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.56% 97.09%
CHEMBL2514 O95665 Neurotensin receptor 2 88.51% 100.00%
CHEMBL4581 P52732 Kinesin-like protein 1 87.63% 93.18%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.90% 95.89%
CHEMBL1628481 P35414 Apelin receptor 85.51% 97.89%
CHEMBL4816 Q9Y243 Serine/threonine-protein kinase AKT3 84.44% 96.28%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 84.13% 96.90%
CHEMBL2185 Q96GD4 Serine/threonine-protein kinase Aurora-B 83.85% 96.80%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 83.51% 95.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 83.43% 97.29%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 83.37% 98.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.78% 100.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 82.78% 92.32%
CHEMBL3776 Q14790 Caspase-8 82.51% 97.06%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.41% 99.23%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.26% 94.33%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 81.53% 89.67%
CHEMBL3401 O75469 Pregnane X receptor 80.63% 94.73%
CHEMBL1075317 P61964 WD repeat-containing protein 5 80.41% 96.33%
CHEMBL5028 O14672 ADAM10 80.04% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 139587659
LOTUS LTS0254477
wikiData Q77571364