methyl (1S,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate

Details

Top
Internal ID ab733428-5cbc-495c-a8ed-84f1b512afc0
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name methyl (1S,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C31H37NO11/c1-7-31(39)12-17(43-18-11-15(32(3)4)25(33)13(2)42-18)20-21(24(31)30(38)41-6)29(37)22-23(28(20)36)27(35)19-14(26(22)34)9-8-10-16(19)40-5/h8-10,13,15,17-18,24-25,33,36-37,39H,7,11-12H2,1-6H3/t13-,15-,17-,18-,24+,25+,31-/m0/s1
InChI Key XSSVYBYWQBNYOH-PRRVMEHZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C31H37NO11
Molecular Weight 599.60 g/mol
Exact Mass 599.23666100 g/mol
Topological Polar Surface Area (TPSA) 172.00 Ų
XlogP 3.60
Atomic LogP (AlogP) 2.17
H-Bond Acceptor 12
H-Bond Donor 4
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of methyl (1S,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8956 89.56%
Caco-2 - 0.7988 79.88%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.3561 35.61%
OATP2B1 inhibitior + 0.5391 53.91%
OATP1B1 inhibitior + 0.9204 92.04%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.7310 73.10%
P-glycoprotein inhibitior + 0.7284 72.84%
P-glycoprotein substrate + 0.8893 88.93%
CYP3A4 substrate + 0.7195 71.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8121 81.21%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.8326 83.26%
CYP2C19 inhibition - 0.8518 85.18%
CYP2D6 inhibition - 0.8497 84.97%
CYP1A2 inhibition + 0.5329 53.29%
CYP2C8 inhibition - 0.7538 75.38%
CYP inhibitory promiscuity - 0.8559 85.59%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5984 59.84%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9188 91.88%
Skin irritation - 0.8066 80.66%
Skin corrosion - 0.9390 93.90%
Ames mutagenesis + 0.9800 98.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5716 57.16%
Micronuclear + 0.6500 65.00%
Hepatotoxicity + 0.5676 56.76%
skin sensitisation - 0.8991 89.91%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.6536 65.36%
Acute Oral Toxicity (c) II 0.4884 48.84%
Estrogen receptor binding + 0.8543 85.43%
Androgen receptor binding + 0.7657 76.57%
Thyroid receptor binding + 0.5374 53.74%
Glucocorticoid receptor binding + 0.8376 83.76%
Aromatase binding + 0.7772 77.72%
PPAR gamma + 0.8041 80.41%
Honey bee toxicity - 0.7236 72.36%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9302 93.02%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.36% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.34% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.86% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.17% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.84% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.36% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.95% 99.23%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.03% 96.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.73% 97.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.66% 94.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 88.29% 96.38%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 88.03% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.99% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 87.48% 97.14%
CHEMBL2535 P11166 Glucose transporter 86.87% 98.75%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.95% 85.14%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.89% 93.03%
CHEMBL340 P08684 Cytochrome P450 3A4 84.52% 91.19%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 81.70% 96.00%
CHEMBL3474 P14555 Phospholipase A2 group IIA 81.53% 94.05%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.39% 97.25%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.99% 92.62%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 80.61% 82.69%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 162877114
LOTUS LTS0161497
wikiData Q105341239