4-[(E)-2-[2-carboxy-6-hydroxy-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydroindol-1-yl]ethenyl]pyridine-2,6-dicarboxylic acid

Details

Top
Internal ID baacb123-ae6f-478b-bf47-da70eaf24020
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name 4-[(E)-2-[2-carboxy-6-hydroxy-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydroindol-1-yl]ethenyl]pyridine-2,6-dicarboxylic acid
SMILES (Canonical) C1C(N(C2=CC(=C(C=C21)OC3C(C(C(C(O3)CO)O)O)O)O)C=CC4=CC(=NC(=C4)C(=O)O)C(=O)O)C(=O)O
SMILES (Isomeric) C1C(N(C2=CC(=C(C=C21)OC3C(C(C(C(O3)CO)O)O)O)O)/C=C/C4=CC(=NC(=C4)C(=O)O)C(=O)O)C(=O)O
InChI InChI=1S/C24H24N2O13/c27-8-17-18(29)19(30)20(31)24(39-17)38-16-6-10-5-14(23(36)37)26(13(10)7-15(16)28)2-1-9-3-11(21(32)33)25-12(4-9)22(34)35/h1-4,6-7,14,17-20,24,27-31H,5,8H2,(H,32,33)(H,34,35)(H,36,37)/b2-1+
InChI Key JGRJFJIJVQCUMW-OWOJBTEDSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C24H24N2O13
Molecular Weight 548.50 g/mol
Exact Mass 548.12783882 g/mol
Topological Polar Surface Area (TPSA) 248.00 Ų
XlogP -0.20
Atomic LogP (AlogP) -1.15
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 4-[(E)-2-[2-carboxy-6-hydroxy-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydroindol-1-yl]ethenyl]pyridine-2,6-dicarboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4711 47.11%
Caco-2 - 0.9069 90.69%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.3852 38.52%
OATP2B1 inhibitior - 0.8406 84.06%
OATP1B1 inhibitior + 0.8858 88.58%
OATP1B3 inhibitior + 0.9355 93.55%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8302 83.02%
P-glycoprotein inhibitior - 0.4678 46.78%
P-glycoprotein substrate - 0.7675 76.75%
CYP3A4 substrate + 0.5936 59.36%
CYP2C9 substrate - 0.8002 80.02%
CYP2D6 substrate - 0.8494 84.94%
CYP3A4 inhibition - 0.8787 87.87%
CYP2C9 inhibition - 0.7832 78.32%
CYP2C19 inhibition - 0.8287 82.87%
CYP2D6 inhibition - 0.8728 87.28%
CYP1A2 inhibition - 0.6271 62.71%
CYP2C8 inhibition + 0.4807 48.07%
CYP inhibitory promiscuity - 0.6542 65.42%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.4897 48.97%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9260 92.60%
Skin irritation - 0.8032 80.32%
Skin corrosion - 0.9429 94.29%
Ames mutagenesis - 0.7523 75.23%
Human Ether-a-go-go-Related Gene inhibition - 0.5545 55.45%
Micronuclear + 0.9300 93.00%
Hepatotoxicity - 0.6571 65.71%
skin sensitisation - 0.8698 86.98%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.7012 70.12%
Acute Oral Toxicity (c) III 0.6214 62.14%
Estrogen receptor binding + 0.6715 67.15%
Androgen receptor binding + 0.5539 55.39%
Thyroid receptor binding - 0.5504 55.04%
Glucocorticoid receptor binding - 0.5434 54.34%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.5890 58.90%
Honey bee toxicity - 0.8563 85.63%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.8073 80.73%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.63% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.06% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.06% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.59% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.58% 86.33%
CHEMBL220 P22303 Acetylcholinesterase 91.08% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.54% 96.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.53% 99.23%
CHEMBL1881 P43116 Prostanoid EP2 receptor 84.66% 93.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.27% 89.00%
CHEMBL1811 P34995 Prostanoid EP1 receptor 83.83% 95.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.70% 92.94%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.33% 90.71%
CHEMBL3891 P07384 Calpain 1 82.86% 93.04%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.08% 95.89%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.20% 96.90%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Beta vulgaris
Opuntia ficus-indica

Cross-Links

Top
PubChem 131750867
LOTUS LTS0016988
wikiData Q104392907