12-Hydroxy-3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-10,13-dimethyl-17-[6-methyl-3-oxo-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,7,8,9,11,12,14,15,17-dodecahydrocyclopenta[a]phenanthren-16-one

Details

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Internal ID 88bb34cc-f5aa-4353-ab37-ae5ab7406a69
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name 12-hydroxy-3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-10,13-dimethyl-17-[6-methyl-3-oxo-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,7,8,9,11,12,14,15,17-dodecahydrocyclopenta[a]phenanthren-16-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C6CC(C7(C(C6CC=C5C4)CC(=O)C7C(C)C(=O)CCC(C)COC8C(C(C(C(O8)CO)O)O)O)C)O)C)CO)O)O)O
SMILES (Isomeric) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C6CC(C7(C(C6CC=C5C4)CC(=O)C7C(C)C(=O)CCC(C)COC8C(C(C(C(O8)CO)O)O)O)C)O)C)CO)O)O)O
InChI InChI=1S/C51H82O23/c1-19(18-67-46-40(63)39(62)36(59)30(16-52)71-46)7-10-28(54)20(2)33-29(55)14-27-25-9-8-23-13-24(11-12-50(23,5)26(25)15-32(56)51(27,33)6)70-49-45(74-48-42(65)38(61)35(58)22(4)69-48)43(66)44(31(17-53)72-49)73-47-41(64)37(60)34(57)21(3)68-47/h8,19-22,24-27,30-49,52-53,56-66H,7,9-18H2,1-6H3
InChI Key TYACHJWACWHCFD-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H82O23
Molecular Weight 1063.20 g/mol
Exact Mass 1062.52468886 g/mol
Topological Polar Surface Area (TPSA) 371.00 Ų
XlogP -3.50
Atomic LogP (AlogP) -2.96
H-Bond Acceptor 23
H-Bond Donor 13
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 12-Hydroxy-3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-10,13-dimethyl-17-[6-methyl-3-oxo-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,7,8,9,11,12,14,15,17-dodecahydrocyclopenta[a]phenanthren-16-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7521 75.21%
Caco-2 - 0.8772 87.72%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.8375 83.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8411 84.11%
OATP1B3 inhibitior + 0.8381 83.81%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5798 57.98%
BSEP inhibitior + 0.8154 81.54%
P-glycoprotein inhibitior + 0.7425 74.25%
P-glycoprotein substrate + 0.6874 68.74%
CYP3A4 substrate + 0.7429 74.29%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8581 85.81%
CYP3A4 inhibition - 0.8852 88.52%
CYP2C9 inhibition - 0.9245 92.45%
CYP2C19 inhibition - 0.9426 94.26%
CYP2D6 inhibition - 0.9538 95.38%
CYP1A2 inhibition - 0.9246 92.46%
CYP2C8 inhibition + 0.6869 68.69%
CYP inhibitory promiscuity - 0.9675 96.75%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5863 58.63%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9028 90.28%
Skin irritation + 0.5512 55.12%
Skin corrosion - 0.9411 94.11%
Ames mutagenesis - 0.8218 82.18%
Human Ether-a-go-go-Related Gene inhibition + 0.7670 76.70%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9342 93.42%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity - 0.8644 86.44%
Acute Oral Toxicity (c) III 0.5383 53.83%
Estrogen receptor binding + 0.8579 85.79%
Androgen receptor binding + 0.7514 75.14%
Thyroid receptor binding + 0.5988 59.88%
Glucocorticoid receptor binding + 0.7831 78.31%
Aromatase binding + 0.6680 66.80%
PPAR gamma + 0.8230 82.30%
Honey bee toxicity - 0.6669 66.69%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9503 95.03%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.08% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.36% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.46% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.21% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.49% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.30% 89.00%
CHEMBL226 P30542 Adenosine A1 receptor 92.09% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.91% 100.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.00% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.48% 94.45%
CHEMBL5255 O00206 Toll-like receptor 4 88.34% 92.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.88% 93.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.11% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.08% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.09% 95.56%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 85.01% 93.04%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.64% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 84.38% 94.75%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 84.10% 91.24%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 82.74% 98.46%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.97% 97.36%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.79% 96.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.84% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.54% 91.07%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.16% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clintonia udensis

Cross-Links

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PubChem 162983701
LOTUS LTS0041392
wikiData Q105267196