(2R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-2-(4-hydroxyphenyl)acetonitrile

Details

Top
Internal ID 2db424d5-5ec3-426b-9f7d-db267a12eab1
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Cyanogenic glycosides
IUPAC Name (2R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-2-(4-hydroxyphenyl)acetonitrile
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H27NO12/c21-5-10(8-1-3-9(24)4-2-8)30-20-17(29)18(14(26)12(7-23)32-20)33-19-16(28)15(27)13(25)11(6-22)31-19/h1-4,10-20,22-29H,6-7H2/t10-,11+,12+,13+,14+,15-,16+,17+,18-,19-,20+/m0/s1
InChI Key ISXAZEDCLUFTLP-RPBWYTPFSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C20H27NO12
Molecular Weight 473.40 g/mol
Exact Mass 473.15332530 g/mol
Topological Polar Surface Area (TPSA) 223.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -3.40
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-2-(4-hydroxyphenyl)acetonitrile

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9395 93.95%
Caco-2 - 0.8911 89.11%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6050 60.50%
OATP2B1 inhibitior - 0.8607 86.07%
OATP1B1 inhibitior + 0.8866 88.66%
OATP1B3 inhibitior + 0.9523 95.23%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.8996 89.96%
P-glycoprotein inhibitior - 0.7386 73.86%
P-glycoprotein substrate - 0.8921 89.21%
CYP3A4 substrate + 0.5306 53.06%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8159 81.59%
CYP3A4 inhibition - 0.8642 86.42%
CYP2C9 inhibition - 0.8700 87.00%
CYP2C19 inhibition - 0.8651 86.51%
CYP2D6 inhibition - 0.8973 89.73%
CYP1A2 inhibition - 0.8982 89.82%
CYP2C8 inhibition - 0.6332 63.32%
CYP inhibitory promiscuity - 0.6856 68.56%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6439 64.39%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.9465 94.65%
Skin irritation - 0.8432 84.32%
Skin corrosion - 0.9647 96.47%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6840 68.40%
Micronuclear - 0.6500 65.00%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.8782 87.82%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.5222 52.22%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity - 0.6662 66.62%
Acute Oral Toxicity (c) II 0.6352 63.52%
Estrogen receptor binding + 0.6763 67.63%
Androgen receptor binding + 0.6572 65.72%
Thyroid receptor binding + 0.6055 60.55%
Glucocorticoid receptor binding - 0.5968 59.68%
Aromatase binding + 0.7375 73.75%
PPAR gamma + 0.7558 75.58%
Honey bee toxicity - 0.4872 48.72%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7050 70.50%
Fish aquatic toxicity - 0.8139 81.39%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.65% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 93.20% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.96% 96.09%
CHEMBL242 Q92731 Estrogen receptor beta 89.30% 98.35%
CHEMBL2581 P07339 Cathepsin D 87.62% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 87.00% 86.92%
CHEMBL3401 O75469 Pregnane X receptor 86.35% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.10% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.84% 99.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.43% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.43% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.91% 96.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.82% 86.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hydrangea macrophylla

Cross-Links

Top
PubChem 162931466
LOTUS LTS0176551
wikiData Q105119866