2-(3,5-dihydroxy-4-methoxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one

Details

Top
Internal ID 5f9d0d11-e4f0-4f02-85ba-8e4c753e1a2f
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 2-(3,5-dihydroxy-4-methoxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OC3=C(OC4=CC(=CC(=C4C3=O)O)O)C5=CC(=C(C(=C5)O)OC)O)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)OC3=C(OC4=CC(=CC(=C4C3=O)O)O)C5=CC(=C(C(=C5)O)OC)O)O)O)O)O)O)O
InChI InChI=1S/C28H32O17/c1-8-17(33)20(36)22(38)27(42-8)41-7-15-18(34)21(37)23(39)28(44-15)45-26-19(35)16-11(30)5-10(29)6-14(16)43-24(26)9-3-12(31)25(40-2)13(32)4-9/h3-6,8,15,17-18,20-23,27-34,36-39H,7H2,1-2H3/t8-,15+,17-,18+,20+,21-,22+,23+,27+,28-/m0/s1
InChI Key HUWKDTSUZUFXJV-UKYSFDKRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C28H32O17
Molecular Weight 640.50 g/mol
Exact Mass 640.16394955 g/mol
Topological Polar Surface Area (TPSA) 275.00 Ų
XlogP -1.30
Atomic LogP (AlogP) -1.68
H-Bond Acceptor 17
H-Bond Donor 10
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 2-(3,5-dihydroxy-4-methoxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4777 47.77%
Caco-2 - 0.9101 91.01%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.6902 69.02%
OATP2B1 inhibitior - 0.5779 57.79%
OATP1B1 inhibitior + 0.8684 86.84%
OATP1B3 inhibitior + 0.9479 94.79%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.5596 55.96%
P-glycoprotein inhibitior - 0.5793 57.93%
P-glycoprotein substrate + 0.5718 57.18%
CYP3A4 substrate + 0.6295 62.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8527 85.27%
CYP3A4 inhibition - 0.8619 86.19%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.7471 74.71%
CYP inhibitory promiscuity - 0.6670 66.70%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6995 69.95%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9074 90.74%
Skin irritation - 0.8249 82.49%
Skin corrosion - 0.9594 95.94%
Ames mutagenesis + 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7061 70.61%
Micronuclear + 0.7492 74.92%
Hepatotoxicity + 0.5750 57.50%
skin sensitisation - 0.9436 94.36%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity - 0.8921 89.21%
Acute Oral Toxicity (c) III 0.6904 69.04%
Estrogen receptor binding + 0.8269 82.69%
Androgen receptor binding - 0.5050 50.50%
Thyroid receptor binding + 0.5383 53.83%
Glucocorticoid receptor binding + 0.6425 64.25%
Aromatase binding + 0.5861 58.61%
PPAR gamma + 0.6779 67.79%
Honey bee toxicity - 0.7824 78.24%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.8477 84.77%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.52% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.38% 89.00%
CHEMBL2581 P07339 Cathepsin D 96.29% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.66% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.67% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.56% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 92.62% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.77% 99.17%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 89.44% 95.64%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.09% 85.14%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.55% 97.36%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.84% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 82.09% 91.49%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.38% 95.89%
CHEMBL4208 P20618 Proteasome component C5 81.36% 90.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.17% 99.23%
CHEMBL3194 P02766 Transthyretin 80.88% 90.71%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ginkgo biloba

Cross-Links

Top
PubChem 100618036
LOTUS LTS0017866
wikiData Q105034095