8-Oxodeoxycoformycin

Details

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Internal ID 9950c23e-0411-47a0-8536-7856fe067786
Taxonomy Organoheterocyclic compounds > Imidazodiazepines
IUPAC Name 3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-4,7-dihydroimidazo[4,5-d][1,3]diazepin-8-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C11H14N4O4/c16-3-8-6(17)1-9(19-8)15-5-14-10-7(18)2-12-4-13-11(10)15/h4-6,8-9,16-17H,1-3H2,(H,12,13)/t6-,8+,9+/m0/s1
InChI Key PNAAOYLIDNSLKV-NBEYISGCSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C11H14N4O4
Molecular Weight 266.25 g/mol
Exact Mass 266.10150494 g/mol
Topological Polar Surface Area (TPSA) 109.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -0.84
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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dehydrodeoxycoformycin
C02957
AC1L9876
SureCN6407434
SCHEMBL6407434
CHEBI:27419
3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-4,7-dihydroimidazo[4,5-d][1,3]diazepin-8-one
Q27103120
3-(2-deoxy-beta-D-erythro-pentofuranosyl)-6,7-dihydroimidazo[4,5-d][1,3]diazepin-8(3H)-one
3-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]-4,7-dihydroimidazo[4,5-d][1,3]diazepin-8-one

2D Structure

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2D Structure of 8-Oxodeoxycoformycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9531 95.31%
Caco-2 - 0.8453 84.53%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Nucleus 0.6481 64.81%
OATP2B1 inhibitior - 0.8634 86.34%
OATP1B1 inhibitior + 0.9190 91.90%
OATP1B3 inhibitior + 0.9400 94.00%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.8705 87.05%
P-glycoprotein inhibitior - 0.9416 94.16%
P-glycoprotein substrate - 0.8461 84.61%
CYP3A4 substrate + 0.5271 52.71%
CYP2C9 substrate - 0.5968 59.68%
CYP2D6 substrate - 0.8553 85.53%
CYP3A4 inhibition - 0.9459 94.59%
CYP2C9 inhibition - 0.8908 89.08%
CYP2C19 inhibition - 0.9059 90.59%
CYP2D6 inhibition - 0.9193 91.93%
CYP1A2 inhibition - 0.8377 83.77%
CYP2C8 inhibition - 0.8986 89.86%
CYP inhibitory promiscuity - 0.9275 92.75%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.6315 63.15%
Eye corrosion - 0.9886 98.86%
Eye irritation - 0.9701 97.01%
Skin irritation - 0.7505 75.05%
Skin corrosion - 0.9277 92.77%
Ames mutagenesis - 0.7407 74.07%
Human Ether-a-go-go-Related Gene inhibition - 0.7091 70.91%
Micronuclear + 0.9700 97.00%
Hepatotoxicity + 0.7648 76.48%
skin sensitisation - 0.8454 84.54%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.7561 75.61%
Acute Oral Toxicity (c) III 0.5777 57.77%
Estrogen receptor binding - 0.5213 52.13%
Androgen receptor binding - 0.7159 71.59%
Thyroid receptor binding + 0.5306 53.06%
Glucocorticoid receptor binding + 0.5428 54.28%
Aromatase binding + 0.5955 59.55%
PPAR gamma + 0.6541 65.41%
Honey bee toxicity - 0.7883 78.83%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity - 0.7534 75.34%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.30% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.76% 85.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.24% 97.09%
CHEMBL4040 P28482 MAP kinase ERK2 92.63% 83.82%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.92% 94.00%
CHEMBL2581 P07339 Cathepsin D 88.61% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.26% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.03% 89.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.91% 89.34%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 85.45% 95.83%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 85.03% 98.46%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.75% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.43% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.22% 95.56%
CHEMBL3038469 P24941 CDK2/Cyclin A 80.24% 91.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 439866
LOTUS LTS0162294
wikiData Q27103120