methyl (4S,5E,6S)-4-[2-[(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

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Internal ID 7f998c4d-b946-4db8-949f-5ad6ba436f8d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5E,6S)-4-[2-[(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H32O14/c1-3-12-13(7-19(30)36-10-17(29)11-4-5-15(27)16(28)6-11)14(23(34)35-2)9-37-24(12)39-25-22(33)21(32)20(31)18(8-26)38-25/h3-6,9,13,17-18,20-22,24-29,31-33H,7-8,10H2,1-2H3/b12-3+/t13-,17+,18+,20+,21-,22+,24-,25-/m0/s1
InChI Key WRDXQRMHELNFOK-ZDVSSOLQSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H32O14
Molecular Weight 556.50 g/mol
Exact Mass 556.17920569 g/mol
Topological Polar Surface Area (TPSA) 222.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -1.14
H-Bond Acceptor 14
H-Bond Donor 7
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,5E,6S)-4-[2-[(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6473 64.73%
Caco-2 - 0.8976 89.76%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.5963 59.63%
OATP2B1 inhibitior - 0.8616 86.16%
OATP1B1 inhibitior + 0.7525 75.25%
OATP1B3 inhibitior + 0.9531 95.31%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5517 55.17%
P-glycoprotein inhibitior - 0.5640 56.40%
P-glycoprotein substrate + 0.5167 51.67%
CYP3A4 substrate + 0.6463 64.63%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8751 87.51%
CYP3A4 inhibition - 0.7385 73.85%
CYP2C9 inhibition - 0.8404 84.04%
CYP2C19 inhibition - 0.8104 81.04%
CYP2D6 inhibition - 0.8943 89.43%
CYP1A2 inhibition - 0.8621 86.21%
CYP2C8 inhibition + 0.6479 64.79%
CYP inhibitory promiscuity - 0.8832 88.32%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6832 68.32%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9318 93.18%
Skin irritation - 0.8190 81.90%
Skin corrosion - 0.9504 95.04%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6501 65.01%
Micronuclear - 0.5800 58.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.7931 79.31%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.8417 84.17%
Acute Oral Toxicity (c) III 0.6669 66.69%
Estrogen receptor binding + 0.8197 81.97%
Androgen receptor binding + 0.6297 62.97%
Thyroid receptor binding + 0.5166 51.66%
Glucocorticoid receptor binding + 0.7146 71.46%
Aromatase binding - 0.5331 53.31%
PPAR gamma + 0.6790 67.90%
Honey bee toxicity - 0.7193 71.93%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 0.8713 87.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.34% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.23% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.09% 85.14%
CHEMBL2581 P07339 Cathepsin D 93.07% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 92.37% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.85% 99.17%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 91.84% 95.64%
CHEMBL1951 P21397 Monoamine oxidase A 90.88% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.62% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.32% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.05% 86.92%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.82% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.47% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.42% 99.15%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.14% 90.71%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.05% 95.83%
CHEMBL4208 P20618 Proteasome component C5 81.06% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Fraxinus americana

Cross-Links

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PubChem 102461563
LOTUS LTS0037583
wikiData Q105311187