(3S,5S,6S,8S,9R,10S,13R,14S,15R,17R)-10,13-dimethyl-17-[(2R,5S)-6-methyl-5-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol

Details

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Internal ID 6e908461-3382-40d3-a374-c6917d75e23d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (3S,5S,6S,8S,9R,10S,13R,14S,15R,17R)-10,13-dimethyl-17-[(2R,5S)-6-methyl-5-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C33H58O10/c1-16(2)23(42-30-28(40)27(39)26(38)24(15-34)43-30)7-6-17(3)19-13-21(36)29-32(19,5)11-9-25-31(4)10-8-18(35)12-20(31)22(37)14-33(25,29)41/h16-30,34-41H,6-15H2,1-5H3/t17-,18+,19-,20-,21-,22+,23+,24-,25-,26-,27+,28-,29-,30-,31+,32-,33+/m1/s1
InChI Key NJUBTRJEDROBQK-RPXCZLKLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C33H58O10
Molecular Weight 614.80 g/mol
Exact Mass 614.40299804 g/mol
Topological Polar Surface Area (TPSA) 180.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 1.32
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,5S,6S,8S,9R,10S,13R,14S,15R,17R)-10,13-dimethyl-17-[(2R,5S)-6-methyl-5-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-2-yl]-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6620 66.20%
Caco-2 - 0.8549 85.49%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6681 66.81%
OATP2B1 inhibitior - 0.5847 58.47%
OATP1B1 inhibitior + 0.8204 82.04%
OATP1B3 inhibitior + 0.8978 89.78%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6792 67.92%
BSEP inhibitior - 0.8353 83.53%
P-glycoprotein inhibitior + 0.6206 62.06%
P-glycoprotein substrate - 0.5524 55.24%
CYP3A4 substrate + 0.7252 72.52%
CYP2C9 substrate - 0.7983 79.83%
CYP2D6 substrate - 0.8352 83.52%
CYP3A4 inhibition - 0.8900 89.00%
CYP2C9 inhibition - 0.8438 84.38%
CYP2C19 inhibition - 0.8862 88.62%
CYP2D6 inhibition - 0.9602 96.02%
CYP1A2 inhibition - 0.8470 84.70%
CYP2C8 inhibition - 0.5685 56.85%
CYP inhibitory promiscuity - 0.9522 95.22%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7385 73.85%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9223 92.23%
Skin irritation - 0.6579 65.79%
Skin corrosion - 0.9528 95.28%
Ames mutagenesis - 0.6543 65.43%
Human Ether-a-go-go-Related Gene inhibition + 0.7245 72.45%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.8170 81.70%
skin sensitisation - 0.9280 92.80%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.6858 68.58%
Acute Oral Toxicity (c) I 0.4874 48.74%
Estrogen receptor binding + 0.6328 63.28%
Androgen receptor binding + 0.6690 66.90%
Thyroid receptor binding - 0.5835 58.35%
Glucocorticoid receptor binding - 0.4923 49.23%
Aromatase binding + 0.5947 59.47%
PPAR gamma + 0.5966 59.66%
Honey bee toxicity - 0.6795 67.95%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.8417 84.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.20% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.44% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 96.99% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.84% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.22% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 94.55% 98.10%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 94.02% 95.58%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.99% 96.61%
CHEMBL233 P35372 Mu opioid receptor 92.44% 97.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.91% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.70% 95.89%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 89.64% 92.86%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.52% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.30% 95.89%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.06% 96.21%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.00% 89.05%
CHEMBL220 P22303 Acetylcholinesterase 86.95% 94.45%
CHEMBL268 P43235 Cathepsin K 86.02% 96.85%
CHEMBL2996 Q05655 Protein kinase C delta 85.29% 97.79%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 85.28% 100.00%
CHEMBL4581 P52732 Kinesin-like protein 1 84.98% 93.18%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.46% 97.14%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 83.36% 92.50%
CHEMBL2581 P07339 Cathepsin D 83.26% 98.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.04% 95.50%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.95% 96.47%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.91% 100.00%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 82.83% 92.78%
CHEMBL4394 Q9NYA1 Sphingosine kinase 1 82.68% 96.03%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 82.50% 82.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.41% 93.56%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 81.84% 95.36%
CHEMBL2094135 Q96BI3 Gamma-secretase 81.73% 98.05%
CHEMBL221 P23219 Cyclooxygenase-1 80.26% 90.17%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 80.20% 95.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.18% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 163036033
LOTUS LTS0097673
wikiData Q105180324