Gibbane-1,10-dicarboxylic acid, 2,4a-dihydroxy-1-methyl-8-methylene-, 1,4a-lactone, (1alpha,2beta,4aalpha,4bbeta,10beta)-

Details

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Internal ID da85860f-0fb7-44b6-90bc-51fd1aa26267
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > C19-gibberellins > C19-gibberellin 6-carboxylic acids
IUPAC Name (1R,2R,5R,8R,9S,10R,12S)-12-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid
SMILES (Canonical) CC12C(CCC3(C1C(C45C3CCC(C4)C(=C)C5)C(=O)O)OC2=O)O
SMILES (Isomeric) CC12[C@H](CC[C@@]3([C@@H]1[C@@H]([C@]45[C@H]3CC[C@H](C4)C(=C)C5)C(=O)O)OC2=O)O
InChI InChI=1S/C19H24O5/c1-9-7-18-8-10(9)3-4-11(18)19-6-5-12(20)17(2,16(23)24-19)14(19)13(18)15(21)22/h10-14,20H,1,3-8H2,2H3,(H,21,22)/t10-,11-,12+,13-,14-,17?,18+,19-/m1/s1
InChI Key RSQSQJNRHICNNH-WTVOOMFRSA-N
Popularity 12 references in papers

Physical and Chemical Properties

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Molecular Formula C19H24O5
Molecular Weight 332.40 g/mol
Exact Mass 332.16237386 g/mol
Topological Polar Surface Area (TPSA) 83.80 Ų
XlogP 1.70
Atomic LogP (AlogP) 2.14
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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468-44-0
(1R,2R,5R,8R,9S,10R,12S)-12-Hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid
GibberellinA4
SCHEMBL7601319
Gibbane-1,10-dicarboxylic acid, 2,4a-dihydroxy-1-methyl-8-methylene-, 1,4a-lactone, (1.alpha.,2.beta.,4a.alpha.,4b.beta.,10.beta.)-
LMPR0104170021

2D Structure

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2D Structure of Gibbane-1,10-dicarboxylic acid, 2,4a-dihydroxy-1-methyl-8-methylene-, 1,4a-lactone, (1alpha,2beta,4aalpha,4bbeta,10beta)-

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9834 98.34%
Caco-2 + 0.5091 50.91%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.7547 75.47%
OATP2B1 inhibitior - 0.8594 85.94%
OATP1B1 inhibitior + 0.9128 91.28%
OATP1B3 inhibitior + 0.9237 92.37%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6592 65.92%
BSEP inhibitior - 0.9407 94.07%
P-glycoprotein inhibitior - 0.8962 89.62%
P-glycoprotein substrate - 0.7491 74.91%
CYP3A4 substrate + 0.6491 64.91%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8456 84.56%
CYP3A4 inhibition - 0.7960 79.60%
CYP2C9 inhibition - 0.8987 89.87%
CYP2C19 inhibition - 0.8833 88.33%
CYP2D6 inhibition - 0.9492 94.92%
CYP1A2 inhibition - 0.7942 79.42%
CYP2C8 inhibition - 0.6297 62.97%
CYP inhibitory promiscuity - 0.9583 95.83%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.4814 48.14%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.9080 90.80%
Skin irritation + 0.5170 51.70%
Skin corrosion - 0.8746 87.46%
Ames mutagenesis - 0.7800 78.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6796 67.96%
Micronuclear - 0.7300 73.00%
Hepatotoxicity + 0.5368 53.68%
skin sensitisation - 0.7817 78.17%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity + 0.7442 74.42%
Acute Oral Toxicity (c) IV 0.4947 49.47%
Estrogen receptor binding + 0.8918 89.18%
Androgen receptor binding + 0.5743 57.43%
Thyroid receptor binding + 0.6191 61.91%
Glucocorticoid receptor binding + 0.7422 74.22%
Aromatase binding + 0.6349 63.49%
PPAR gamma - 0.5963 59.63%
Honey bee toxicity - 0.9679 96.79%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9922 99.22%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 97.90% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.99% 95.56%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 86.63% 93.00%
CHEMBL4246 P42680 Tyrosine-protein kinase TEC 85.53% 82.05%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.41% 97.25%
CHEMBL340 P08684 Cytochrome P450 3A4 84.14% 91.19%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.40% 93.04%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.29% 96.77%
CHEMBL5028 O14672 ADAM10 81.94% 97.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.61% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 81.34% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.87% 94.45%
CHEMBL2581 P07339 Cathepsin D 80.85% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.27% 89.00%
CHEMBL4530 P00488 Coagulation factor XIII 80.10% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana
Dioscorea japonica
Dioscorea oppositifolia
Dioscorea polystachya

Cross-Links

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PubChem 443457
NPASS NPC107173
LOTUS LTS0137275
wikiData Q75063263