(5R,6S)-5,6-dihydroxy-1-[2-hydroxy-4-methoxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]octan-1-one

Details

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Internal ID b13215fa-0692-4617-aa6e-e04efbd3a1c4
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (5R,6S)-5,6-dihydroxy-1-[2-hydroxy-4-methoxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]octan-1-one
SMILES (Canonical) CCC(C(CCCC(=O)C1=C(C=C(C=C1OC2C(C(C(C(O2)CO)O)O)O)OC)O)O)O
SMILES (Isomeric) CC[C@@H]([C@@H](CCCC(=O)C1=C(C=C(C=C1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)OC)O)O)O
InChI InChI=1S/C21H32O11/c1-3-11(23)12(24)5-4-6-13(25)17-14(26)7-10(30-2)8-15(17)31-21-20(29)19(28)18(27)16(9-22)32-21/h7-8,11-12,16,18-24,26-29H,3-6,9H2,1-2H3/t11-,12+,16+,18+,19-,20+,21+/m0/s1
InChI Key CHRKNYYROQLCJC-LOFKYIILSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H32O11
Molecular Weight 460.50 g/mol
Exact Mass 460.19446183 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.94
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (5R,6S)-5,6-dihydroxy-1-[2-hydroxy-4-methoxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]octan-1-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4621 46.21%
Caco-2 - 0.8152 81.52%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.8409 84.09%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8603 86.03%
OATP1B3 inhibitior + 0.9175 91.75%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7792 77.92%
BSEP inhibitior - 0.6158 61.58%
P-glycoprotein inhibitior - 0.7351 73.51%
P-glycoprotein substrate - 0.6783 67.83%
CYP3A4 substrate + 0.5862 58.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8492 84.92%
CYP3A4 inhibition - 0.6139 61.39%
CYP2C9 inhibition - 0.8205 82.05%
CYP2C19 inhibition - 0.7831 78.31%
CYP2D6 inhibition - 0.8770 87.70%
CYP1A2 inhibition - 0.7294 72.94%
CYP2C8 inhibition - 0.6036 60.36%
CYP inhibitory promiscuity - 0.8664 86.64%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7930 79.30%
Eye corrosion - 0.9925 99.25%
Eye irritation - 0.9447 94.47%
Skin irritation - 0.8060 80.60%
Skin corrosion - 0.9604 96.04%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7703 77.03%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6551 65.51%
skin sensitisation - 0.8224 82.24%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.7798 77.98%
Acute Oral Toxicity (c) III 0.7116 71.16%
Estrogen receptor binding + 0.6987 69.87%
Androgen receptor binding - 0.5638 56.38%
Thyroid receptor binding - 0.5623 56.23%
Glucocorticoid receptor binding + 0.6767 67.67%
Aromatase binding - 0.5000 50.00%
PPAR gamma - 0.5746 57.46%
Honey bee toxicity - 0.8488 84.88%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.7877 78.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.95% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.41% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.03% 99.17%
CHEMBL2581 P07339 Cathepsin D 94.63% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 92.20% 94.73%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.81% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.64% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.14% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.71% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.48% 97.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.94% 90.71%
CHEMBL4208 P20618 Proteasome component C5 83.03% 90.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 82.47% 95.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.30% 92.94%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.18% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.10% 94.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.24% 100.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 80.06% 99.15%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Syzygium levinei

Cross-Links

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PubChem 163010079
LOTUS LTS0154405
wikiData Q104959170