[(2R,3R,4S,5R,6R)-6-[(R)-cyano(phenyl)methoxy]-3,5-dihydroxy-4-(3,4,5-trihydroxybenzoyl)oxyoxan-2-yl]methyl 3,4,5-trihydroxybenzoate

Details

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Internal ID 42921cff-a6d9-4cf3-aea4-bc5c88760675
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Cyanogenic glycosides
IUPAC Name [(2R,3R,4S,5R,6R)-6-[(R)-cyano(phenyl)methoxy]-3,5-dihydroxy-4-(3,4,5-trihydroxybenzoyl)oxyoxan-2-yl]methyl 3,4,5-trihydroxybenzoate
SMILES (Canonical) C1=CC=C(C=C1)C(C#N)OC2C(C(C(C(O2)COC(=O)C3=CC(=C(C(=C3)O)O)O)O)OC(=O)C4=CC(=C(C(=C4)O)O)O)O
SMILES (Isomeric) C1=CC=C(C=C1)[C@H](C#N)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)COC(=O)C3=CC(=C(C(=C3)O)O)O)O)OC(=O)C4=CC(=C(C(=C4)O)O)O)O
InChI InChI=1S/C28H25NO14/c29-10-19(12-4-2-1-3-5-12)41-28-24(37)25(43-27(39)14-8-17(32)22(35)18(33)9-14)23(36)20(42-28)11-40-26(38)13-6-15(30)21(34)16(31)7-13/h1-9,19-20,23-25,28,30-37H,11H2/t19-,20+,23+,24+,25-,28+/m0/s1
InChI Key YBXFOTINCCIAPR-SZHLUKEYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H25NO14
Molecular Weight 599.50 g/mol
Exact Mass 599.12750447 g/mol
Topological Polar Surface Area (TPSA) 257.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 1.03
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3R,4S,5R,6R)-6-[(R)-cyano(phenyl)methoxy]-3,5-dihydroxy-4-(3,4,5-trihydroxybenzoyl)oxyoxan-2-yl]methyl 3,4,5-trihydroxybenzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6889 68.89%
Caco-2 - 0.8808 88.08%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.6539 65.39%
OATP2B1 inhibitior - 0.8481 84.81%
OATP1B1 inhibitior + 0.7122 71.22%
OATP1B3 inhibitior - 0.2710 27.10%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.6550 65.50%
P-glycoprotein inhibitior + 0.6525 65.25%
P-glycoprotein substrate - 0.8428 84.28%
CYP3A4 substrate + 0.6039 60.39%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8490 84.90%
CYP3A4 inhibition - 0.7527 75.27%
CYP2C9 inhibition - 0.8121 81.21%
CYP2C19 inhibition - 0.8784 87.84%
CYP2D6 inhibition - 0.9279 92.79%
CYP1A2 inhibition - 0.8406 84.06%
CYP2C8 inhibition + 0.5732 57.32%
CYP inhibitory promiscuity - 0.7906 79.06%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7699 76.99%
Eye corrosion - 0.9916 99.16%
Eye irritation - 0.8882 88.82%
Skin irritation - 0.8448 84.48%
Skin corrosion - 0.9640 96.40%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8357 83.57%
Micronuclear + 0.7107 71.07%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.8487 84.87%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.9549 95.49%
Acute Oral Toxicity (c) III 0.7476 74.76%
Estrogen receptor binding + 0.7472 74.72%
Androgen receptor binding + 0.6850 68.50%
Thyroid receptor binding - 0.4916 49.16%
Glucocorticoid receptor binding + 0.6061 60.61%
Aromatase binding - 0.5685 56.85%
PPAR gamma + 0.7286 72.86%
Honey bee toxicity - 0.6570 65.70%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.7831 78.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.45% 91.11%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 98.10% 83.00%
CHEMBL1951 P21397 Monoamine oxidase A 95.44% 91.49%
CHEMBL2581 P07339 Cathepsin D 94.38% 98.95%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 94.16% 95.64%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.65% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.53% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 90.63% 94.73%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 89.69% 95.17%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.85% 99.17%
CHEMBL2535 P11166 Glucose transporter 87.53% 98.75%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 87.49% 96.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.95% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.48% 99.15%
CHEMBL3194 P02766 Transthyretin 84.18% 90.71%
CHEMBL226 P30542 Adenosine A1 receptor 84.06% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.90% 95.56%
CHEMBL5028 O14672 ADAM10 81.34% 97.50%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.93% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 80.79% 92.50%
CHEMBL340 P08684 Cytochrome P450 3A4 80.39% 91.19%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.04% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phyllagathis rotundifolia

Cross-Links

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PubChem 11103977
LOTUS LTS0152146
wikiData Q105346095