(2S,3R,8S,9R,10R,13R,14S,16R,17R)-17-[(2S,5R)-5-[(2S)-1,2-dihydroxypropan-2-yl]-2-methyloxolan-2-yl]-3,16-dihydroxy-4,4,9,13,14-pentamethyl-2-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one

Details

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Internal ID 4845a306-3098-4c56-8a35-79ab22df53ac
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2S,3R,8S,9R,10R,13R,14S,16R,17R)-17-[(2S,5R)-5-[(2S)-1,2-dihydroxypropan-2-yl]-2-methyloxolan-2-yl]-3,16-dihydroxy-4,4,9,13,14-pentamethyl-2-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H58O12/c1-31(2)17-8-9-22-32(3)13-19(39)28(35(6)11-10-24(48-35)34(5,45)16-38)33(32,4)14-23(40)36(22,7)18(17)12-20(29(31)44)46-30-27(43)26(42)25(41)21(15-37)47-30/h8,18-22,24-30,37-39,41-45H,9-16H2,1-7H3/t18-,19-,20+,21-,22+,24-,25-,26+,27-,28+,29+,30-,32+,33-,34+,35+,36+/m1/s1
InChI Key TYPCBKVVVOTAON-TUIWCJSESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C36H58O12
Molecular Weight 682.80 g/mol
Exact Mass 682.39282728 g/mol
Topological Polar Surface Area (TPSA) 207.00 Ų
XlogP -0.10
Atomic LogP (AlogP) 0.58
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,8S,9R,10R,13R,14S,16R,17R)-17-[(2S,5R)-5-[(2S)-1,2-dihydroxypropan-2-yl]-2-methyloxolan-2-yl]-3,16-dihydroxy-4,4,9,13,14-pentamethyl-2-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8931 89.31%
Caco-2 - 0.8566 85.66%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8712 87.12%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8460 84.60%
OATP1B3 inhibitior + 0.8426 84.26%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.7397 73.97%
P-glycoprotein inhibitior + 0.7256 72.56%
P-glycoprotein substrate - 0.5754 57.54%
CYP3A4 substrate + 0.7338 73.38%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8733 87.33%
CYP3A4 inhibition - 0.8847 88.47%
CYP2C9 inhibition - 0.8631 86.31%
CYP2C19 inhibition - 0.9157 91.57%
CYP2D6 inhibition - 0.9300 93.00%
CYP1A2 inhibition - 0.9156 91.56%
CYP2C8 inhibition + 0.6110 61.10%
CYP inhibitory promiscuity - 0.9151 91.51%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5218 52.18%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9235 92.35%
Skin irritation - 0.5588 55.88%
Skin corrosion - 0.9383 93.83%
Ames mutagenesis - 0.8570 85.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7486 74.86%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.6084 60.84%
skin sensitisation - 0.9052 90.52%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.7197 71.97%
Acute Oral Toxicity (c) I 0.5999 59.99%
Estrogen receptor binding + 0.6211 62.11%
Androgen receptor binding + 0.7485 74.85%
Thyroid receptor binding - 0.5796 57.96%
Glucocorticoid receptor binding + 0.6649 66.49%
Aromatase binding + 0.6989 69.89%
PPAR gamma + 0.6554 65.54%
Honey bee toxicity - 0.6669 66.69%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9652 96.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.82% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.08% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.64% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.33% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 92.20% 95.93%
CHEMBL2581 P07339 Cathepsin D 91.70% 98.95%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.96% 96.21%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.25% 96.61%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 89.06% 97.33%
CHEMBL259 P32245 Melanocortin receptor 4 88.63% 95.38%
CHEMBL1937 Q92769 Histone deacetylase 2 88.32% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.80% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.50% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.39% 86.33%
CHEMBL220 P22303 Acetylcholinesterase 86.37% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.26% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.15% 85.14%
CHEMBL2996 Q05655 Protein kinase C delta 86.00% 97.79%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.49% 96.77%
CHEMBL5255 O00206 Toll-like receptor 4 84.10% 92.50%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 83.03% 94.23%
CHEMBL4829 O00763 Acetyl-CoA carboxylase 2 82.04% 98.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.81% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.74% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.65% 86.92%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.51% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.75% 92.62%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.69% 93.04%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.02% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 163004658
LOTUS LTS0218333
wikiData Q105267640