2,5-dihydroxy-1,6-dimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

Details

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Internal ID cc710b0c-cfdd-40d6-9db5-7cb953fcf9bb
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 2,5-dihydroxy-1,6-dimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H22O12/c1-29-10-5-9(32-21-18(28)17(27)14(24)11(6-22)33-21)13-16(26)12-8(31-20(13)15(10)25)4-3-7(23)19(12)30-2/h3-5,11,14,17-18,21-25,27-28H,6H2,1-2H3/t11-,14-,17+,18-,21-/m1/s1
InChI Key UJAITWKHHMHYPJ-AWULYWAKSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H22O12
Molecular Weight 466.40 g/mol
Exact Mass 466.11112613 g/mol
Topological Polar Surface Area (TPSA) 185.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.45
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2,5-dihydroxy-1,6-dimethoxy-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5891 58.91%
Caco-2 - 0.8218 82.18%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5382 53.82%
OATP2B1 inhibitior - 0.5571 55.71%
OATP1B1 inhibitior + 0.8789 87.89%
OATP1B3 inhibitior + 0.9702 97.02%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.7339 73.39%
P-glycoprotein inhibitior - 0.6802 68.02%
P-glycoprotein substrate - 0.7912 79.12%
CYP3A4 substrate + 0.5792 57.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8324 83.24%
CYP3A4 inhibition - 0.8887 88.87%
CYP2C9 inhibition - 0.9431 94.31%
CYP2C19 inhibition - 0.9262 92.62%
CYP2D6 inhibition - 0.9179 91.79%
CYP1A2 inhibition - 0.8804 88.04%
CYP2C8 inhibition + 0.5150 51.50%
CYP inhibitory promiscuity - 0.8059 80.59%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7283 72.83%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.8928 89.28%
Skin irritation - 0.8272 82.72%
Skin corrosion - 0.9636 96.36%
Ames mutagenesis + 0.7536 75.36%
Human Ether-a-go-go-Related Gene inhibition - 0.5123 51.23%
Micronuclear + 0.6133 61.33%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.9266 92.66%
Acute Oral Toxicity (c) III 0.7037 70.37%
Estrogen receptor binding + 0.7704 77.04%
Androgen receptor binding + 0.5331 53.31%
Thyroid receptor binding - 0.5173 51.73%
Glucocorticoid receptor binding + 0.7607 76.07%
Aromatase binding + 0.6889 68.89%
PPAR gamma + 0.6657 66.57%
Honey bee toxicity - 0.8062 80.62%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.6994 69.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.71% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.02% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.25% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.55% 95.56%
CHEMBL2581 P07339 Cathepsin D 92.37% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.51% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.12% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.48% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.79% 94.45%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.15% 99.15%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 84.56% 89.62%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.46% 96.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.80% 99.23%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 81.65% 80.78%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.94% 96.21%
CHEMBL3401 O75469 Pregnane X receptor 80.67% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.41% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Swertia kouitchensis

Cross-Links

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PubChem 71747859
LOTUS LTS0174964
wikiData Q105273814