3,5'-Dihydroxy-16-[4-hydroxy-5-[5-hydroxy-6-(hydroxymethyl)-3,4-bis[(3,4,5-trihydroxyoxan-2-yl)oxy]oxan-2-yl]oxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxy-3',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,6'-oxane]-2'-one

Details

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Internal ID 5894be69-77ff-45da-a189-a66bf403fa3e
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 3,5'-dihydroxy-16-[4-hydroxy-5-[5-hydroxy-6-(hydroxymethyl)-3,4-bis[(3,4,5-trihydroxyoxan-2-yl)oxy]oxan-2-yl]oxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxy-3',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,6'-oxane]-2'-one
SMILES (Canonical) CC1CC(C2(C(C3C(O2)C(C4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(CO2)O)O)O)O)OC2C(C(C(C(O2)C)O)O)O)C)C)O)C)OC1=O)O
SMILES (Isomeric) CC1CC(C2(C(C3C(O2)C(C4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(CO2)O)O)O)O)OC2C(C(C(C(O2)C)O)O)O)C)C)O)C)OC1=O)O
InChI InChI=1S/C55H88O28/c1-18-12-29(60)55(83-47(18)71)19(2)30-43(82-55)36(65)31-23-7-6-21-13-22(8-10-53(21,4)24(23)9-11-54(30,31)5)75-51-45(80-50-40(69)37(66)32(61)20(3)74-50)41(70)42(28(15-57)77-51)78-52-46(81-49-39(68)34(63)26(59)17-73-49)44(35(64)27(14-56)76-52)79-48-38(67)33(62)25(58)16-72-48/h18-46,48-52,56-70H,6-17H2,1-5H3
InChI Key ZLDXDSLOWPJHII-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C55H88O28
Molecular Weight 1197.30 g/mol
Exact Mass 1196.54621215 g/mol
Topological Polar Surface Area (TPSA) 431.00 Ų
XlogP -3.60
Atomic LogP (AlogP) -5.31
H-Bond Acceptor 28
H-Bond Donor 15
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3,5'-Dihydroxy-16-[4-hydroxy-5-[5-hydroxy-6-(hydroxymethyl)-3,4-bis[(3,4,5-trihydroxyoxan-2-yl)oxy]oxan-2-yl]oxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxy-3',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,6'-oxane]-2'-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5734 57.34%
Caco-2 - 0.8782 87.82%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7299 72.99%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8508 85.08%
OATP1B3 inhibitior + 0.9419 94.19%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.9449 94.49%
P-glycoprotein inhibitior + 0.7433 74.33%
P-glycoprotein substrate + 0.6619 66.19%
CYP3A4 substrate + 0.7606 76.06%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8731 87.31%
CYP3A4 inhibition - 0.9265 92.65%
CYP2C9 inhibition - 0.9261 92.61%
CYP2C19 inhibition - 0.9124 91.24%
CYP2D6 inhibition - 0.9583 95.83%
CYP1A2 inhibition - 0.9264 92.64%
CYP2C8 inhibition + 0.6789 67.89%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9033 90.33%
Skin irritation - 0.6168 61.68%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.7396 73.96%
Human Ether-a-go-go-Related Gene inhibition + 0.8246 82.46%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.9422 94.22%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.8838 88.38%
Acute Oral Toxicity (c) I 0.7641 76.41%
Estrogen receptor binding + 0.8695 86.95%
Androgen receptor binding + 0.7425 74.25%
Thyroid receptor binding + 0.5390 53.90%
Glucocorticoid receptor binding + 0.7384 73.84%
Aromatase binding + 0.6424 64.24%
PPAR gamma + 0.8056 80.56%
Honey bee toxicity - 0.5531 55.31%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.8173 81.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.17% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.13% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.29% 97.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 94.06% 96.77%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.09% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.57% 97.25%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 90.93% 91.24%
CHEMBL1937 Q92769 Histone deacetylase 2 90.77% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.11% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 89.24% 91.49%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.62% 96.61%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.57% 86.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.99% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.88% 94.45%
CHEMBL226 P30542 Adenosine A1 receptor 86.30% 95.93%
CHEMBL5103 Q969S8 Histone deacetylase 10 86.28% 90.08%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.26% 94.00%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 85.78% 97.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.48% 97.36%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.24% 95.56%
CHEMBL2581 P07339 Cathepsin D 84.72% 98.95%
CHEMBL1871 P10275 Androgen Receptor 84.63% 96.43%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.03% 92.94%
CHEMBL5255 O00206 Toll-like receptor 4 83.12% 92.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.71% 95.89%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.66% 97.50%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.00% 95.83%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.93% 95.89%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 80.35% 89.67%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ardisia compressa
Solanum nigrum

Cross-Links

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PubChem 73236877
LOTUS LTS0100252
wikiData Q105232796