(2R,3R)-2,8-dihydroxy-6-[[(2R,3S,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy]-3-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one

Details

Top
Internal ID 3a6ecc04-dd55-4100-a4f5-78f2734ce572
Taxonomy Phenylpropanoids and polyketides > Isoflavonoids > Isoflavans > Isoflavanols
IUPAC Name (2R,3R)-2,8-dihydroxy-6-[[(2R,3S,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy]-3-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one
SMILES (Canonical) C1=C(C=C(C(=C1O)O)O)C2C(OC3=C(C2=O)C=C(C=C3O)OCC4C(C(C(C(O4)O)O)O)O)O
SMILES (Isomeric) C1=C(C=C(C(=C1O)O)O)[C@@H]2[C@@H](OC3=C(C2=O)C=C(C=C3O)OC[C@@H]4[C@H]([C@@H]([C@H]([C@@H](O4)O)O)O)O)O
InChI InChI=1S/C21H22O13/c22-9-1-6(2-10(23)15(9)26)13-14(25)8-3-7(4-11(24)19(8)34-20(13)30)32-5-12-16(27)17(28)18(29)21(31)33-12/h1-4,12-13,16-18,20-24,26-31H,5H2/t12-,13+,16-,17+,18-,20-,21-/m1/s1
InChI Key YIOKTIQMFFJYCN-XRXXVTMBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C21H22O13
Molecular Weight 482.40 g/mol
Exact Mass 482.10604075 g/mol
Topological Polar Surface Area (TPSA) 227.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -1.64
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R)-2,8-dihydroxy-6-[[(2R,3S,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy]-3-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4831 48.31%
Caco-2 - 0.9344 93.44%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.6755 67.55%
OATP2B1 inhibitior - 0.5556 55.56%
OATP1B1 inhibitior + 0.8116 81.16%
OATP1B3 inhibitior + 0.8601 86.01%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior - 0.6997 69.97%
P-glycoprotein inhibitior - 0.6996 69.96%
P-glycoprotein substrate - 0.9048 90.48%
CYP3A4 substrate + 0.5872 58.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8277 82.77%
CYP3A4 inhibition - 0.8972 89.72%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9412 94.12%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity - 0.7389 73.89%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6854 68.54%
Eye corrosion - 0.9926 99.26%
Eye irritation - 0.8193 81.93%
Skin irritation - 0.7899 78.99%
Skin corrosion - 0.9676 96.76%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5330 53.30%
Micronuclear + 0.7292 72.92%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.9130 91.30%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.8389 83.89%
Acute Oral Toxicity (c) III 0.4462 44.62%
Estrogen receptor binding + 0.7038 70.38%
Androgen receptor binding + 0.6149 61.49%
Thyroid receptor binding + 0.6004 60.04%
Glucocorticoid receptor binding + 0.5407 54.07%
Aromatase binding + 0.5393 53.93%
PPAR gamma + 0.6179 61.79%
Honey bee toxicity - 0.7613 76.13%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.6400 64.00%
Fish aquatic toxicity + 0.8944 89.44%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.29% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 96.16% 91.49%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.89% 99.15%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.29% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.03% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.67% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 92.18% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.65% 89.00%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 91.54% 80.33%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 91.03% 95.78%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.33% 97.09%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 90.14% 95.64%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.23% 95.56%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 86.01% 83.57%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.13% 86.33%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.25% 92.94%
CHEMBL3194 P02766 Transthyretin 82.53% 90.71%
CHEMBL2581 P07339 Cathepsin D 80.65% 98.95%
CHEMBL4208 P20618 Proteasome component C5 80.19% 90.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Echinocereus triglochidiatus

Cross-Links

Top
PubChem 162976856
LOTUS LTS0040182
wikiData Q105348944