methyl (4S,5Z,6S)-4-[2-[[(1S,2R,3R,5R)-5-(1,3-dihydroxypropan-2-yl)-3-[2-[(2S,3Z,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

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Internal ID a1dadfed-3ee2-469d-ba3b-ecb0162ef133
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5Z,6S)-4-[2-[[(1S,2R,3R,5R)-5-(1,3-dihydroxypropan-2-yl)-3-[2-[(2S,3Z,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical) CC=C1C(C(=COC1OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)CC(=O)OCC3C(C(CC3C(CO)CO)OC(=O)CC4C(=COC(C4=CC)OC5C(C(C(C(O5)CO)O)O)O)C(=O)OC)C
SMILES (Isomeric) C/C=C\1/[C@@H](C(=CO[C@H]1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)OC)CC(=O)OC[C@@H]3[C@H]([C@@H](C[C@H]3C(CO)CO)OC(=O)C[C@@H]\4C(=CO[C@H](/C4=C\C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C(=O)OC)C
InChI InChI=1S/C44H64O24/c1-6-20-23(26(39(57)59-4)16-62-41(20)67-43-37(55)35(53)33(51)29(13-47)65-43)9-31(49)61-15-25-18(3)28(8-22(25)19(11-45)12-46)64-32(50)10-24-21(7-2)42(63-17-27(24)40(58)60-5)68-44-38(56)36(54)34(52)30(14-48)66-44/h6-7,16-19,22-25,28-30,33-38,41-48,51-56H,8-15H2,1-5H3/b20-6-,21-7-/t18-,22+,23+,24+,25-,28-,29-,30-,33-,34-,35+,36+,37-,38-,41+,42+,43+,44+/m1/s1
InChI Key QGVKUNWDVOEJOC-IPOPJIAVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C44H64O24
Molecular Weight 977.00 g/mol
Exact Mass 976.37875290 g/mol
Topological Polar Surface Area (TPSA) 363.00 Ų
XlogP -3.20
Atomic LogP (AlogP) -3.32
H-Bond Acceptor 24
H-Bond Donor 10
Rotatable Bonds 18

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,5Z,6S)-4-[2-[[(1S,2R,3R,5R)-5-(1,3-dihydroxypropan-2-yl)-3-[2-[(2S,3Z,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7009 70.09%
Caco-2 - 0.8659 86.59%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8078 80.78%
OATP2B1 inhibitior - 0.8651 86.51%
OATP1B1 inhibitior + 0.7493 74.93%
OATP1B3 inhibitior + 0.9381 93.81%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9443 94.43%
P-glycoprotein inhibitior + 0.7405 74.05%
P-glycoprotein substrate + 0.6386 63.86%
CYP3A4 substrate + 0.6886 68.86%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8894 88.94%
CYP3A4 inhibition - 0.8938 89.38%
CYP2C9 inhibition - 0.9008 90.08%
CYP2C19 inhibition - 0.8752 87.52%
CYP2D6 inhibition - 0.9192 91.92%
CYP1A2 inhibition - 0.9037 90.37%
CYP2C8 inhibition + 0.6493 64.93%
CYP inhibitory promiscuity - 0.9228 92.28%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7346 73.46%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9018 90.18%
Skin irritation - 0.7780 77.80%
Skin corrosion - 0.9585 95.85%
Ames mutagenesis + 0.5646 56.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7337 73.37%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.7477 74.77%
skin sensitisation - 0.8967 89.67%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.6081 60.81%
Acute Oral Toxicity (c) III 0.5111 51.11%
Estrogen receptor binding + 0.8064 80.64%
Androgen receptor binding + 0.6972 69.72%
Thyroid receptor binding + 0.5534 55.34%
Glucocorticoid receptor binding + 0.7519 75.19%
Aromatase binding + 0.5743 57.43%
PPAR gamma + 0.7823 78.23%
Honey bee toxicity - 0.6944 69.44%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8918 89.18%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.55% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.80% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.69% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.01% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 86.99% 94.73%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 86.95% 95.83%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.54% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 86.17% 91.19%
CHEMBL2996 Q05655 Protein kinase C delta 85.93% 97.79%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.85% 86.92%
CHEMBL2581 P07339 Cathepsin D 85.66% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.12% 99.17%
CHEMBL5028 O14672 ADAM10 84.91% 97.50%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 84.11% 94.80%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.58% 94.45%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.22% 94.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.96% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.67% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Jasminum fluminense
Jasminum sambac

Cross-Links

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PubChem 101920415
LOTUS LTS0009469
wikiData Q105220678