[(2S,3R,4S,5R)-2-[(2S,3R,4S,5S)-3-acetyloxy-5-hydroxy-2-[[(3S,8R,9S,10R,13S,14S,16S,17S)-17-hydroxy-10,13-dimethyl-17-[(2S)-6-methyl-3-oxoheptan-2-yl]-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-4-yl]oxy-4,5-dihydroxyoxan-3-yl] 4-methoxybenzoate

Details

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Internal ID 307ad351-440f-47ff-8b9e-8f015be9d344
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(2S,3R,4S,5R)-2-[(2S,3R,4S,5S)-3-acetyloxy-5-hydroxy-2-[[(3S,8R,9S,10R,13S,14S,16S,17S)-17-hydroxy-10,13-dimethyl-17-[(2S)-6-methyl-3-oxoheptan-2-yl]-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-4-yl]oxy-4,5-dihydroxyoxan-3-yl] 4-methoxybenzoate
SMILES (Canonical) CC(C)CCC(=O)C(C)C1(C(CC2C1(CCC3C2CC=C4C3(CCC(C4)OC5C(C(C(C(O5)CO)O)O)O)C)C)OC6C(C(C(CO6)O)OC7C(C(C(CO7)O)O)OC(=O)C8=CC=C(C=C8)OC)OC(=O)C)O
SMILES (Isomeric) C[C@H](C(=O)CCC(C)C)[C@]1([C@H](C[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC[C@@H](C4)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)C)O[C@H]6[C@@H]([C@H]([C@H](CO6)O)O[C@H]7[C@@H]([C@H]([C@@H](CO7)O)O)OC(=O)C8=CC=C(C=C8)OC)OC(=O)C)O
InChI InChI=1S/C53H78O20/c1-25(2)8-15-35(56)26(3)53(64)39(21-34-32-14-11-29-20-31(16-18-51(29,5)33(32)17-19-52(34,53)6)69-48-43(62)42(61)41(60)38(22-54)70-48)71-50-46(68-27(4)55)44(37(58)24-67-50)73-49-45(40(59)36(57)23-66-49)72-47(63)28-9-12-30(65-7)13-10-28/h9-13,25-26,31-34,36-46,48-50,54,57-62,64H,8,14-24H2,1-7H3/t26-,31+,32-,33+,34+,36-,37+,38-,39+,40+,41-,42+,43-,44+,45-,46-,48-,49+,50+,51+,52+,53-/m1/s1
InChI Key DHFXTGDEERXNBZ-UWBOJGLSSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C53H78O20
Molecular Weight 1035.20 g/mol
Exact Mass 1034.50864487 g/mol
Topological Polar Surface Area (TPSA) 296.00 Ų
XlogP 2.70
Atomic LogP (AlogP) 1.85
H-Bond Acceptor 20
H-Bond Donor 8
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5R)-2-[(2S,3R,4S,5S)-3-acetyloxy-5-hydroxy-2-[[(3S,8R,9S,10R,13S,14S,16S,17S)-17-hydroxy-10,13-dimethyl-17-[(2S)-6-methyl-3-oxoheptan-2-yl]-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-4-yl]oxy-4,5-dihydroxyoxan-3-yl] 4-methoxybenzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8781 87.81%
Caco-2 - 0.8687 86.87%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8008 80.08%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8225 82.25%
OATP1B3 inhibitior + 0.8323 83.23%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9392 93.92%
P-glycoprotein inhibitior + 0.7487 74.87%
P-glycoprotein substrate + 0.7495 74.95%
CYP3A4 substrate + 0.7599 75.99%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8751 87.51%
CYP3A4 inhibition - 0.7619 76.19%
CYP2C9 inhibition - 0.8134 81.34%
CYP2C19 inhibition - 0.8377 83.77%
CYP2D6 inhibition - 0.9222 92.22%
CYP1A2 inhibition - 0.8260 82.60%
CYP2C8 inhibition + 0.8125 81.25%
CYP inhibitory promiscuity - 0.9377 93.77%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5618 56.18%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9012 90.12%
Skin irritation - 0.6515 65.15%
Skin corrosion - 0.9399 93.99%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7589 75.89%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.6694 66.94%
skin sensitisation - 0.8924 89.24%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.8686 86.86%
Acute Oral Toxicity (c) I 0.4416 44.16%
Estrogen receptor binding + 0.7889 78.89%
Androgen receptor binding + 0.7597 75.97%
Thyroid receptor binding + 0.6199 61.99%
Glucocorticoid receptor binding + 0.7800 78.00%
Aromatase binding + 0.5595 55.95%
PPAR gamma + 0.8312 83.12%
Honey bee toxicity - 0.6345 63.45%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9792 97.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.53% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.22% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.97% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 96.75% 95.93%
CHEMBL2581 P07339 Cathepsin D 95.58% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.78% 97.09%
CHEMBL4208 P20618 Proteasome component C5 92.92% 90.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 92.46% 91.07%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.43% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.72% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.33% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.51% 96.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 90.20% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.12% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 89.88% 91.19%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.74% 95.56%
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 88.26% 91.65%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.16% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 88.10% 92.62%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 88.07% 94.08%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.46% 91.24%
CHEMBL4581 P52732 Kinesin-like protein 1 87.21% 93.18%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.92% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.43% 89.00%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 86.35% 95.17%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 84.94% 94.97%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 84.44% 95.71%
CHEMBL5255 O00206 Toll-like receptor 4 82.99% 92.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.25% 94.45%
CHEMBL2996 Q05655 Protein kinase C delta 82.09% 97.79%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.17% 94.33%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.08% 100.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.04% 86.92%
CHEMBL5028 O14672 ADAM10 80.14% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum saundersiae

Cross-Links

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PubChem 163075436
LOTUS LTS0028203
wikiData Q104980003