methyl (1S,4aR,7aR)-4a-hydroxy-7-[(4-hydroxybenzoyl)oxymethyl]-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID 6f9ec1f3-cc38-4548-b42f-f167bd992ac0
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aR,7aR)-4a-hydroxy-7-[(4-hydroxybenzoyl)oxymethyl]-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H28O13/c1-33-21(31)14-10-35-22(37-23-19(29)18(28)17(27)15(8-25)36-23)16-12(6-7-24(14,16)32)9-34-20(30)11-2-4-13(26)5-3-11/h2-6,10,15-19,22-23,25-29,32H,7-9H2,1H3/t15-,16+,17-,18+,19-,22+,23+,24+/m1/s1
InChI Key LUHYEBOZNVRIDY-UOADZIBUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C24H28O13
Molecular Weight 524.50 g/mol
Exact Mass 524.15299094 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -1.54
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,4aR,7aR)-4a-hydroxy-7-[(4-hydroxybenzoyl)oxymethyl]-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7051 70.51%
Caco-2 - 0.9023 90.23%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.6666 66.66%
OATP2B1 inhibitior - 0.8539 85.39%
OATP1B1 inhibitior + 0.7998 79.98%
OATP1B3 inhibitior + 0.9654 96.54%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8126 81.26%
P-glycoprotein inhibitior - 0.5389 53.89%
P-glycoprotein substrate - 0.5678 56.78%
CYP3A4 substrate + 0.6748 67.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8569 85.69%
CYP3A4 inhibition - 0.9243 92.43%
CYP2C9 inhibition - 0.8989 89.89%
CYP2C19 inhibition - 0.7918 79.18%
CYP2D6 inhibition - 0.8936 89.36%
CYP1A2 inhibition - 0.8767 87.67%
CYP2C8 inhibition + 0.7269 72.69%
CYP inhibitory promiscuity - 0.9079 90.79%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5818 58.18%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9325 93.25%
Skin irritation - 0.7653 76.53%
Skin corrosion - 0.9476 94.76%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3618 36.18%
Micronuclear - 0.5800 58.00%
Hepatotoxicity - 0.7199 71.99%
skin sensitisation - 0.8322 83.22%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity + 0.5323 53.23%
Acute Oral Toxicity (c) III 0.4122 41.22%
Estrogen receptor binding + 0.7878 78.78%
Androgen receptor binding + 0.7246 72.46%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.6688 66.88%
Aromatase binding + 0.6155 61.55%
PPAR gamma + 0.6632 66.32%
Honey bee toxicity - 0.7913 79.13%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 0.8999 89.99%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.73% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.14% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.44% 86.33%
CHEMBL2581 P07339 Cathepsin D 89.52% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.23% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.11% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 86.55% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.32% 99.17%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 86.02% 85.00%
CHEMBL4208 P20618 Proteasome component C5 85.32% 90.00%
CHEMBL3437 Q16853 Amine oxidase, copper containing 85.12% 94.00%
CHEMBL226 P30542 Adenosine A1 receptor 84.72% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.80% 89.00%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 83.47% 89.67%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.11% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.74% 95.83%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.29% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Amphilophium crucigerum

Cross-Links

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PubChem 162892855
LOTUS LTS0106498
wikiData Q105157449