methyl (1S,12S,14R,15Z,18S)-15-ethylidene-12-[(11S,12Z,17S)-12-ethylidene-10-formyl-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2(7),3,5,9-tetraen-4-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate

Details

Top
Internal ID 690bc14e-66ef-4db6-9ebc-6eadbb755d28
Taxonomy Alkaloids and derivatives > Strychnos alkaloids
IUPAC Name methyl (1S,12S,14R,15Z,18S)-15-ethylidene-12-[(11S,12Z,17S)-12-ethylidene-10-formyl-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2(7),3,5,9-tetraen-4-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H44N4O3/c1-5-22-19-43(3)34-17-29-25-9-7-8-10-32(25)41-37(29)28(16-27(22)36(34)39(46)47-4)24-11-12-33-31(15-24)40-13-14-44-20-23(6-2)26(18-35(40)44)30(21-45)38(40)42-33/h5-12,15,21,26-28,34-36,41-42H,13-14,16-20H2,1-4H3/b22-5+,23-6+/t26-,27-,28-,34-,35-,36-,40?/m0/s1
InChI Key GVJFCBIQWCVYNY-SMBQKRSOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C40H44N4O3
Molecular Weight 628.80 g/mol
Exact Mass 628.34134128 g/mol
Topological Polar Surface Area (TPSA) 77.70 Ų
XlogP 4.50
Atomic LogP (AlogP) 6.08
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of methyl (1S,12S,14R,15Z,18S)-15-ethylidene-12-[(11S,12Z,17S)-12-ethylidene-10-formyl-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2(7),3,5,9-tetraen-4-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9545 95.45%
Caco-2 - 0.7794 77.94%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7898 78.98%
OATP2B1 inhibitior + 0.7140 71.40%
OATP1B1 inhibitior + 0.8151 81.51%
OATP1B3 inhibitior + 0.9309 93.09%
MATE1 inhibitior - 0.5819 58.19%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.9947 99.47%
P-glycoprotein inhibitior + 0.9137 91.37%
P-glycoprotein substrate + 0.8243 82.43%
CYP3A4 substrate + 0.7609 76.09%
CYP2C9 substrate - 0.5612 56.12%
CYP2D6 substrate - 0.8289 82.89%
CYP3A4 inhibition + 0.5833 58.33%
CYP2C9 inhibition - 0.6024 60.24%
CYP2C19 inhibition - 0.7279 72.79%
CYP2D6 inhibition - 0.6543 65.43%
CYP1A2 inhibition - 0.5056 50.56%
CYP2C8 inhibition + 0.7751 77.51%
CYP inhibitory promiscuity - 0.5549 55.49%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6202 62.02%
Eye corrosion - 0.9861 98.61%
Eye irritation - 0.9474 94.74%
Skin irritation - 0.7745 77.45%
Skin corrosion - 0.9315 93.15%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9058 90.58%
Micronuclear + 0.6200 62.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.8501 85.01%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity + 0.7601 76.01%
Acute Oral Toxicity (c) III 0.5853 58.53%
Estrogen receptor binding + 0.8657 86.57%
Androgen receptor binding + 0.7711 77.11%
Thyroid receptor binding + 0.6263 62.63%
Glucocorticoid receptor binding + 0.8032 80.32%
Aromatase binding + 0.5328 53.28%
PPAR gamma + 0.7540 75.40%
Honey bee toxicity - 0.6912 69.12%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.6300 63.00%
Fish aquatic toxicity + 0.9966 99.66%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.37% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 98.45% 95.56%
CHEMBL238 Q01959 Dopamine transporter 98.33% 95.88%
CHEMBL228 P31645 Serotonin transporter 98.29% 95.51%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.41% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 96.81% 83.82%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.34% 94.45%
CHEMBL1914 P06276 Butyrylcholinesterase 96.15% 95.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.82% 85.14%
CHEMBL217 P14416 Dopamine D2 receptor 92.41% 95.62%
CHEMBL222 P23975 Norepinephrine transporter 92.34% 96.06%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.23% 97.25%
CHEMBL2535 P11166 Glucose transporter 91.85% 98.75%
CHEMBL2581 P07339 Cathepsin D 90.26% 98.95%
CHEMBL4208 P20618 Proteasome component C5 89.98% 90.00%
CHEMBL233 P35372 Mu opioid receptor 89.85% 97.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.63% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.52% 89.00%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 85.21% 92.67%
CHEMBL4145 Q9UKV0 Histone deacetylase 9 83.40% 85.49%
CHEMBL5028 O14672 ADAM10 83.39% 97.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.26% 95.89%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 83.19% 91.79%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 82.94% 82.38%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 82.60% 96.39%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.13% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tabernaemontana corymbosa

Cross-Links

Top
PubChem 101184895
LOTUS LTS0063603
wikiData Q104667178