methyl (1R,2R,3S,5S)-3-hydroxy-5-[(2S)-3-hydroxy-1-methoxy-1-oxopropan-2-yl]-2-methylcyclopentane-1-carboxylate

Details

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Internal ID e7e25bee-01bb-497e-89bc-3467d4853ce9
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids > Monocyclic monoterpenoids
IUPAC Name methyl (1R,2R,3S,5S)-3-hydroxy-5-[(2S)-3-hydroxy-1-methoxy-1-oxopropan-2-yl]-2-methylcyclopentane-1-carboxylate
SMILES (Canonical) CC1C(CC(C1C(=O)OC)C(CO)C(=O)OC)O
SMILES (Isomeric) C[C@H]1[C@H](C[C@@H]([C@H]1C(=O)OC)[C@@H](CO)C(=O)OC)O
InChI InChI=1S/C12H20O6/c1-6-9(14)4-7(10(6)12(16)18-3)8(5-13)11(15)17-2/h6-10,13-14H,4-5H2,1-3H3/t6-,7+,8+,9-,10-/m0/s1
InChI Key MSNUOOXDHGKSBW-MBXMOIHESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C12H20O6
Molecular Weight 260.28 g/mol
Exact Mass 260.12598835 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP -0.20
Atomic LogP (AlogP) -0.43
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1R,2R,3S,5S)-3-hydroxy-5-[(2S)-3-hydroxy-1-methoxy-1-oxopropan-2-yl]-2-methylcyclopentane-1-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8987 89.87%
Caco-2 + 0.5550 55.50%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.8060 80.60%
OATP2B1 inhibitior - 0.8533 85.33%
OATP1B1 inhibitior + 0.9143 91.43%
OATP1B3 inhibitior + 0.9238 92.38%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.9840 98.40%
P-glycoprotein inhibitior - 0.9407 94.07%
P-glycoprotein substrate - 0.6689 66.89%
CYP3A4 substrate + 0.5535 55.35%
CYP2C9 substrate - 0.7970 79.70%
CYP2D6 substrate - 0.8588 85.88%
CYP3A4 inhibition - 0.7806 78.06%
CYP2C9 inhibition - 0.9208 92.08%
CYP2C19 inhibition - 0.9198 91.98%
CYP2D6 inhibition - 0.9046 90.46%
CYP1A2 inhibition - 0.9015 90.15%
CYP2C8 inhibition - 0.9551 95.51%
CYP inhibitory promiscuity - 0.9694 96.94%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.7854 78.54%
Eye corrosion - 0.9745 97.45%
Eye irritation - 0.8017 80.17%
Skin irritation - 0.8310 83.10%
Skin corrosion - 0.9688 96.88%
Ames mutagenesis - 0.5408 54.08%
Human Ether-a-go-go-Related Gene inhibition - 0.5540 55.40%
Micronuclear - 0.7300 73.00%
Hepatotoxicity + 0.5250 52.50%
skin sensitisation - 0.9068 90.68%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.5864 58.64%
Acute Oral Toxicity (c) III 0.4470 44.70%
Estrogen receptor binding - 0.6632 66.32%
Androgen receptor binding + 0.6731 67.31%
Thyroid receptor binding - 0.6152 61.52%
Glucocorticoid receptor binding - 0.5940 59.40%
Aromatase binding - 0.8332 83.32%
PPAR gamma - 0.8654 86.54%
Honey bee toxicity - 0.7914 79.14%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.8300 83.00%
Fish aquatic toxicity - 0.3729 37.29%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.53% 96.09%
CHEMBL3437 Q16853 Amine oxidase, copper containing 90.76% 94.00%
CHEMBL340 P08684 Cytochrome P450 3A4 90.61% 91.19%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 88.58% 96.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.45% 94.45%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 86.39% 95.71%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.37% 85.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.03% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.63% 97.25%
CHEMBL299 P17252 Protein kinase C alpha 84.74% 98.03%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 84.37% 91.11%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.94% 98.75%
CHEMBL2581 P07339 Cathepsin D 83.15% 98.95%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.88% 94.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.52% 99.17%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 82.35% 97.21%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.39% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Guettarda grazielae

Cross-Links

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PubChem 163009218
LOTUS LTS0120420
wikiData Q105171290