[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxyoxan-2-yl]methyl acetate

Details

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Internal ID 4db1b9c5-154e-4a89-9911-195774f2a825
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxyoxan-2-yl]methyl acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C47H76O18/c1-20-9-14-47(58-18-20)21(2)32-29(65-47)16-28-26-8-7-24-15-25(10-12-45(24,5)27(26)11-13-46(28,32)6)60-44-41(64-42-37(54)35(52)33(50)22(3)59-42)39(56)40(30(17-48)61-44)63-43-38(55)36(53)34(51)31(62-43)19-57-23(4)49/h20-22,24-44,48,50-56H,7-19H2,1-6H3/t20-,21-,22-,24+,25-,26+,27-,28-,29-,30+,31+,32-,33-,34+,35+,36-,37+,38+,39-,40+,41+,42-,43-,44+,45-,46-,47+/m0/s1
InChI Key QPCXNOOIVSKVLM-KCROQFHVSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C47H76O18
Molecular Weight 929.10 g/mol
Exact Mass 928.50316557 g/mol
Topological Polar Surface Area (TPSA) 262.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 0.86
H-Bond Acceptor 18
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxyoxan-2-yl]methyl acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5000 50.00%
Caco-2 - 0.8857 88.57%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7795 77.95%
OATP2B1 inhibitior - 0.8740 87.40%
OATP1B1 inhibitior + 0.8949 89.49%
OATP1B3 inhibitior + 0.9395 93.95%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.7954 79.54%
P-glycoprotein inhibitior + 0.7349 73.49%
P-glycoprotein substrate - 0.6434 64.34%
CYP3A4 substrate + 0.7521 75.21%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8746 87.46%
CYP3A4 inhibition - 0.9505 95.05%
CYP2C9 inhibition - 0.9148 91.48%
CYP2C19 inhibition - 0.8948 89.48%
CYP2D6 inhibition - 0.9589 95.89%
CYP1A2 inhibition - 0.9134 91.34%
CYP2C8 inhibition + 0.6792 67.92%
CYP inhibitory promiscuity - 0.9439 94.39%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6468 64.68%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9100 91.00%
Skin irritation - 0.6781 67.81%
Skin corrosion - 0.9501 95.01%
Ames mutagenesis - 0.7800 78.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7562 75.62%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9250 92.50%
skin sensitisation - 0.9458 94.58%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.8027 80.27%
Acute Oral Toxicity (c) I 0.7157 71.57%
Estrogen receptor binding + 0.8549 85.49%
Androgen receptor binding + 0.6729 67.29%
Thyroid receptor binding - 0.5571 55.71%
Glucocorticoid receptor binding + 0.6454 64.54%
Aromatase binding + 0.6544 65.44%
PPAR gamma + 0.7489 74.89%
Honey bee toxicity - 0.5498 54.98%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5455 54.55%
Fish aquatic toxicity + 0.8713 87.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.84% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.11% 96.61%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.01% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.69% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.60% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 93.24% 92.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 92.63% 89.05%
CHEMBL237 P41145 Kappa opioid receptor 92.03% 98.10%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.92% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.26% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 90.32% 96.77%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.10% 89.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.74% 95.50%
CHEMBL233 P35372 Mu opioid receptor 89.43% 97.93%
CHEMBL226 P30542 Adenosine A1 receptor 88.50% 95.93%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.18% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 88.03% 91.19%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 87.95% 97.31%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 87.44% 97.50%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 86.79% 97.86%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 86.55% 100.00%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.10% 92.86%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.61% 96.38%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 82.42% 92.32%
CHEMBL5028 O14672 ADAM10 82.02% 97.50%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.87% 96.95%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.24% 93.04%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.51% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.31% 86.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.15% 91.24%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.09% 100.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 80.07% 93.10%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus racemosus

Cross-Links

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PubChem 163033552
LOTUS LTS0271567
wikiData Q105225314