(2S,3R,4S,5S,6S)-2-[(3R,6E,10S)-2,10-dihydroxy-2,6,10-trimethyldodeca-6,11-dien-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID ba2892b5-10fd-4dc5-9568-8dbabecde98c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2S,3R,4S,5S,6S)-2-[(3R,6E,10S)-2,10-dihydroxy-2,6,10-trimethyldodeca-6,11-dien-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(C)(C=C)O)CCC(C(C)(C)O)OC1C(C(C(C(O1)CO)O)O)O
SMILES (Isomeric) C/C(=C\CC[C@@](C)(C=C)O)/CC[C@H](C(C)(C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](O1)CO)O)O)O
InChI InChI=1S/C21H38O8/c1-6-21(5,27)11-7-8-13(2)9-10-15(20(3,4)26)29-19-18(25)17(24)16(23)14(12-22)28-19/h6,8,14-19,22-27H,1,7,9-12H2,2-5H3/b13-8+/t14-,15+,16+,17-,18+,19-,21+/m0/s1
InChI Key PFJDJYAPRBPXLV-ADRQEJNHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H38O8
Molecular Weight 418.50 g/mol
Exact Mass 418.25666817 g/mol
Topological Polar Surface Area (TPSA) 140.00 Ų
XlogP 0.70
Atomic LogP (AlogP) 0.39
H-Bond Acceptor 8
H-Bond Donor 6
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S,6S)-2-[(3R,6E,10S)-2,10-dihydroxy-2,6,10-trimethyldodeca-6,11-dien-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5502 55.02%
Caco-2 - 0.7680 76.80%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.8082 80.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8968 89.68%
OATP1B3 inhibitior + 0.8640 86.40%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5542 55.42%
BSEP inhibitior - 0.6429 64.29%
P-glycoprotein inhibitior - 0.6977 69.77%
P-glycoprotein substrate - 0.8138 81.38%
CYP3A4 substrate + 0.6298 62.98%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8469 84.69%
CYP3A4 inhibition - 0.7669 76.69%
CYP2C9 inhibition - 0.7409 74.09%
CYP2C19 inhibition - 0.7704 77.04%
CYP2D6 inhibition - 0.9356 93.56%
CYP1A2 inhibition - 0.8132 81.32%
CYP2C8 inhibition - 0.7090 70.90%
CYP inhibitory promiscuity - 0.9455 94.55%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7247 72.47%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9686 96.86%
Skin irritation - 0.6671 66.71%
Skin corrosion - 0.9553 95.53%
Ames mutagenesis - 0.7654 76.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7476 74.76%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.6665 66.65%
skin sensitisation - 0.8039 80.39%
Respiratory toxicity - 0.7556 75.56%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity + 0.4702 47.02%
Acute Oral Toxicity (c) III 0.6820 68.20%
Estrogen receptor binding + 0.5523 55.23%
Androgen receptor binding - 0.5740 57.40%
Thyroid receptor binding + 0.5797 57.97%
Glucocorticoid receptor binding + 0.7044 70.44%
Aromatase binding + 0.6356 63.56%
PPAR gamma + 0.6678 66.78%
Honey bee toxicity - 0.6246 62.46%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9333 93.33%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3401 O75469 Pregnane X receptor 95.85% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.99% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.66% 99.17%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 91.21% 96.47%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.64% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.96% 96.09%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 88.97% 97.47%
CHEMBL2581 P07339 Cathepsin D 87.20% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 86.21% 97.36%
CHEMBL2996 Q05655 Protein kinase C delta 84.05% 97.79%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.39% 96.61%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.09% 93.56%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.92% 96.90%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Epimedium grandiflorum

Cross-Links

Top
PubChem 163012304
LOTUS LTS0128932
wikiData Q105207788