Lindernioside B

Details

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Internal ID d761d880-3a50-4d47-ab92-503aa37f441a
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3R,4S,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-3-[(2R,3R,4S,5S,6S)-6-carboxy-4-[(2R,3R,4S,5S,6S)-6-carboxy-3,4,5-trihydroxyoxan-2-yl]oxy-3,5-dihydroxyoxan-2-yl]oxy-2-hydroxy-4,6a,6b,14b-tetramethyl-11-methylidene-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-4,8a-dicarboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C41H58O18/c1-16-8-11-41(36(54)55)13-12-38(3)17(18(41)14-16)6-7-20-37(2)15-19(42)30(40(5,35(52)53)21(37)9-10-39(20,38)4)59-34-26(47)27(25(46)29(58-34)32(50)51)56-33-24(45)22(43)23(44)28(57-33)31(48)49/h6,18-30,33-34,42-47H,1,7-15H2,2-5H3,(H,48,49)(H,50,51)(H,52,53)(H,54,55)/t18-,19-,20+,21+,22-,23-,24+,25-,26+,27-,28-,29-,30-,33+,34-,37+,38+,39+,40-,41-/m0/s1
InChI Key MDQAYTNASVLTPJ-JKTGXZNESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C41H58O18
Molecular Weight 838.90 g/mol
Exact Mass 838.36231500 g/mol
Topological Polar Surface Area (TPSA) 308.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 0.63
H-Bond Acceptor 14
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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lindernioside-B
RefChem:924793
(2S,3R,4S,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-3-((2R,3R,4S,5S,6S)-6-carboxy-4-((2R,3R,4S,5S,6S)-6-carboxy-3,4,5-trihydroxyoxan-2-yl)oxy-3,5-dihydroxyoxan-2-yl)oxy-2-hydroxy-4,6a,6b,14b-tetramethyl-11-methylidene-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-4,8a-dicarboxylic acid

2D Structure

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2D Structure of Lindernioside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8463 84.63%
Caco-2 - 0.8792 87.92%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7584 75.84%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8218 82.18%
OATP1B3 inhibitior - 0.2339 23.39%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5842 58.42%
BSEP inhibitior + 0.7110 71.10%
P-glycoprotein inhibitior + 0.7444 74.44%
P-glycoprotein substrate - 0.5804 58.04%
CYP3A4 substrate + 0.7039 70.39%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8798 87.98%
CYP3A4 inhibition - 0.7036 70.36%
CYP2C9 inhibition - 0.9094 90.94%
CYP2C19 inhibition - 0.9157 91.57%
CYP2D6 inhibition - 0.9480 94.80%
CYP1A2 inhibition - 0.8866 88.66%
CYP2C8 inhibition + 0.7453 74.53%
CYP inhibitory promiscuity - 0.9802 98.02%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6094 60.94%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9060 90.60%
Skin irritation + 0.5578 55.78%
Skin corrosion - 0.9176 91.76%
Ames mutagenesis - 0.8700 87.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6439 64.39%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.8440 84.40%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.4622 46.22%
Acute Oral Toxicity (c) IV 0.4026 40.26%
Estrogen receptor binding + 0.7925 79.25%
Androgen receptor binding + 0.7506 75.06%
Thyroid receptor binding - 0.6312 63.12%
Glucocorticoid receptor binding + 0.6664 66.64%
Aromatase binding + 0.6340 63.40%
PPAR gamma + 0.7590 75.90%
Honey bee toxicity - 0.7445 74.45%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9881 98.81%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.78% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.82% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.23% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.71% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.49% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.08% 86.33%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 84.56% 93.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.18% 97.36%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.14% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 83.61% 91.19%
CHEMBL2581 P07339 Cathepsin D 83.23% 98.95%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.14% 94.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.82% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lindernia procumbens

Cross-Links

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PubChem 101682246
LOTUS LTS0074371
wikiData Q105161901