[(2S,3R,4S,5R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18S,19R)-15,19-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-3,5-dihydroxyoxan-4-yl] benzoate

Details

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Internal ID 1b34b10c-efa6-49db-8a35-ea3adea0cac4
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(2S,3R,4S,5R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18S,19R)-15,19-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-3,5-dihydroxyoxan-4-yl] benzoate
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC(C6C5(CC(C(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)OC(=O)C2=CC=CC=C2)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)O)C)O)C)C)OC1
SMILES (Isomeric) C[C@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4C[C@H]([C@@H]6[C@@]5(C[C@H]([C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O[C@H]9[C@@H]([C@H]([C@@H](CO9)O)OC(=O)C2=CC=CC=C2)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)O)C)O)C)C)OC1
InChI InChI=1S/C57H86O25/c1-23-10-13-57(73-21-23)24(2)38-34(82-57)15-28-26-14-30(61)29-16-33(31(62)17-56(29,4)27(26)11-12-55(28,38)3)74-52-44(69)42(67)47(37(20-60)77-52)79-54-49(81-53-43(68)41(66)39(64)35(18-58)75-53)48(40(65)36(19-59)76-54)80-51-45(70)46(32(63)22-72-51)78-50(71)25-8-6-5-7-9-25/h5-9,23-24,26-49,51-54,58-70H,10-22H2,1-4H3/t23-,24-,26+,27-,28-,29+,30+,31+,32+,33+,34-,35+,36+,37+,38-,39+,40+,41-,42+,43+,44+,45+,46-,47-,48-,49+,51-,52+,53-,54-,55-,56+,57+/m0/s1
InChI Key HZUAYGDTGYYSSM-DERCYAORSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C57H86O25
Molecular Weight 1171.30 g/mol
Exact Mass 1170.54581822 g/mol
Topological Polar Surface Area (TPSA) 382.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -2.46
H-Bond Acceptor 25
H-Bond Donor 13
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-6-[(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18S,19R)-15,19-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-3,5-dihydroxyoxan-4-yl] benzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6588 65.88%
Caco-2 - 0.8715 87.15%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7234 72.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8494 84.94%
OATP1B3 inhibitior + 0.9322 93.22%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5250 52.50%
BSEP inhibitior + 0.9212 92.12%
P-glycoprotein inhibitior + 0.7370 73.70%
P-glycoprotein substrate + 0.5624 56.24%
CYP3A4 substrate + 0.7581 75.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.8507 85.07%
CYP2C9 inhibition - 0.9158 91.58%
CYP2C19 inhibition - 0.8917 89.17%
CYP2D6 inhibition - 0.9492 94.92%
CYP1A2 inhibition - 0.9072 90.72%
CYP2C8 inhibition + 0.8125 81.25%
CYP inhibitory promiscuity - 0.9540 95.40%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6239 62.39%
Eye corrosion - 0.9933 99.33%
Eye irritation - 0.9012 90.12%
Skin irritation - 0.6520 65.20%
Skin corrosion - 0.9533 95.33%
Ames mutagenesis - 0.6770 67.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7994 79.94%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9398 93.98%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8659 86.59%
Acute Oral Toxicity (c) I 0.6799 67.99%
Estrogen receptor binding + 0.8395 83.95%
Androgen receptor binding + 0.7248 72.48%
Thyroid receptor binding + 0.5771 57.71%
Glucocorticoid receptor binding + 0.7239 72.39%
Aromatase binding + 0.5754 57.54%
PPAR gamma + 0.8195 81.95%
Honey bee toxicity - 0.5879 58.79%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5845 58.45%
Fish aquatic toxicity + 0.9174 91.74%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.32% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 97.45% 90.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.97% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.20% 86.33%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 94.64% 94.08%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.84% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.09% 97.09%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 89.50% 94.23%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 89.13% 94.62%
CHEMBL2581 P07339 Cathepsin D 88.73% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 87.72% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.17% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.11% 100.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 86.83% 83.00%
CHEMBL5028 O14672 ADAM10 86.30% 97.50%
CHEMBL5255 O00206 Toll-like receptor 4 85.82% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.59% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.17% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.59% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium schubertii

Cross-Links

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PubChem 162893915
LOTUS LTS0219547
wikiData Q105035881