(2R,3R,4S,5S,6R)-2-[(3S,5S,6E,10R)-3,10-dihydroxy-3,7,11-trimethyldodeca-1,6,11-trien-5-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID b4ce345c-73b7-4306-bd6f-9f5fa861f929
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3R,4S,5S,6R)-2-[(3S,5S,6E,10R)-3,10-dihydroxy-3,7,11-trimethyldodeca-1,6,11-trien-5-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(=C)C(CCC(=CC(CC(C)(C=C)O)OC1C(C(C(C(O1)CO)O)O)O)C)O
SMILES (Isomeric) CC(=C)[C@@H](CC/C(=C/[C@H](C[C@@](C)(C=C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)/C)O
InChI InChI=1S/C21H36O8/c1-6-21(5,27)10-14(9-13(4)7-8-15(23)12(2)3)28-20-19(26)18(25)17(24)16(11-22)29-20/h6,9,14-20,22-27H,1-2,7-8,10-11H2,3-5H3/b13-9+/t14-,15-,16-,17-,18+,19-,20-,21-/m1/s1
InChI Key LODOXLBZQHCHJY-IGMBQRSMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H36O8
Molecular Weight 416.50 g/mol
Exact Mass 416.24101810 g/mol
Topological Polar Surface Area (TPSA) 140.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 0.16
H-Bond Acceptor 8
H-Bond Donor 6
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[(3S,5S,6E,10R)-3,10-dihydroxy-3,7,11-trimethyldodeca-1,6,11-trien-5-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5549 55.49%
Caco-2 - 0.7468 74.68%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7246 72.46%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8750 87.50%
OATP1B3 inhibitior + 0.8824 88.24%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior - 0.8366 83.66%
P-glycoprotein inhibitior - 0.7963 79.63%
P-glycoprotein substrate - 0.7696 76.96%
CYP3A4 substrate + 0.6438 64.38%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8469 84.69%
CYP3A4 inhibition - 0.8231 82.31%
CYP2C9 inhibition - 0.8182 81.82%
CYP2C19 inhibition - 0.8109 81.09%
CYP2D6 inhibition - 0.9399 93.99%
CYP1A2 inhibition - 0.8371 83.71%
CYP2C8 inhibition - 0.6089 60.89%
CYP inhibitory promiscuity - 0.9485 94.85%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7294 72.94%
Eye corrosion - 0.9879 98.79%
Eye irritation - 0.9590 95.90%
Skin irritation - 0.6655 66.55%
Skin corrosion - 0.9511 95.11%
Ames mutagenesis - 0.6954 69.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6869 68.69%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.5792 57.92%
skin sensitisation - 0.8279 82.79%
Respiratory toxicity - 0.7000 70.00%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity - 0.6056 60.56%
Acute Oral Toxicity (c) III 0.6394 63.94%
Estrogen receptor binding - 0.5084 50.84%
Androgen receptor binding - 0.5488 54.88%
Thyroid receptor binding + 0.5965 59.65%
Glucocorticoid receptor binding + 0.5650 56.50%
Aromatase binding + 0.6522 65.22%
PPAR gamma + 0.5404 54.04%
Honey bee toxicity - 0.6478 64.78%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.8000 80.00%
Fish aquatic toxicity + 0.8050 80.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.82% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 94.01% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.92% 91.11%
CHEMBL2581 P07339 Cathepsin D 93.84% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.95% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.27% 97.25%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 92.20% 92.68%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.29% 85.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.23% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.46% 96.47%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.96% 96.61%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.09% 93.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.47% 97.36%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.65% 82.50%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 83.22% 90.93%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 81.20% 97.21%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.44% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Amaranthus retroflexus
Saussurea triangulata

Cross-Links

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PubChem 163011655
LOTUS LTS0115330
wikiData Q105154657